BLASTX nr result

ID: Atractylodes21_contig00031253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031253
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...    62   4e-08
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis...    59   4e-07
ref|XP_003598336.1| F-box/kelch-repeat protein [Medicago truncat...    59   5e-07

>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
 Frame = -2

Query: 395 IVGSSAGLFCLYGSYLHPDHHVPNNANVTAVLWNPSIRKSVAIDVPN-----VKNEACTT 231
           +VGSS GL CL G  +                WNPSI++ +A+  P+       +     
Sbjct: 105 LVGSSNGLLCLLGQNIF--------------FWNPSIQRFLALPWPSDIFTVYGSPYKYA 150

Query: 230 LGFGVCPITSDPKIVKISHIWGRTEKTDVYTLSPNIEVYTLSSGEWRTPSCNLPRPSI-Q 54
           LGFG     +D K+V++ +I G     D Y L P +E+Y LS+G WR  + + P   I +
Sbjct: 151 LGFGFDSRANDFKLVRLVYIEGGPPVYD-YELPPRVELYQLSTGSWRQITDSAPCYEILK 209

Query: 53  LRWEHVVIDMFIYWLAF 3
            +W  + ++  ++W+AF
Sbjct: 210 SQWTQIFMNEAVHWIAF 226


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
 Frame = -2

Query: 395 IVGSSAGLFCLYGSYLHPDHHVPNNANVTAVLWNPSIRKSVAIDVPNVKNEAC-TTLGFG 219
           IVGS  G+ CL  ++ H    +        VLWNPSI  SV + +  +  +     LGFG
Sbjct: 101 IVGSCNGIICLTDNHSHILKRI--------VLWNPSIGLSVTLPLQRISYKVSNVVLGFG 152

Query: 218 VCPITSDPKIVKISHIWGRTEKTDVYTLSPNIEVYTLSSGEWR-TPSCNLPRPSIQLRWE 42
               T+D K+++I +    +   D   + P +E++ LS G WR   S ++P   +     
Sbjct: 153 FDSRTNDYKVIRIVYY---STNDDSLMVPPEVEIFELSRGTWRINNSASVPAYDVSKYSS 209

Query: 41  HVVIDMFIYWLAF 3
            +V++  I+W+ +
Sbjct: 210 QIVLEGAIHWVGY 222


>ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449531147|ref|XP_004172549.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 379

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
 Frame = -2

Query: 395 IVGSSAGLFCLYGSYLHPDHHVPNNANVTAVLWNPSIRKSVAIDVPNVKNEACT------ 234
           IVG S GL C  G  L              +LWNPSI++   +DVP   +   T      
Sbjct: 101 IVGVSNGLVCFLGLDL--------------LLWNPSIQR--VVDVPRTSDTVTTYGVPDF 144

Query: 233 -TLGFGVCPITSDPKIVKISHIWGRTEKTDVYTLSPNIEVYTLSSGEWRTPSCNLPRPSI 57
             LGFG      D K+V++ +   +   +  Y  SP +E+Y + +G WR  +   PR  I
Sbjct: 145 YALGFGFDSCADDHKVVRLLYFADKVPFS--YKRSPKVELYEVGTGSWRAINNKAPRCEI 202

Query: 56  -QLRWEHVVIDMFIYWLAF 3
            +  W    ++  ++W+A+
Sbjct: 203 VRSGWTQAFVNGAVHWIAY 221


>ref|XP_003598336.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487384|gb|AES68587.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 255

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
 Frame = -2

Query: 407 HHSHIVGSSAGLFCLYGSYLHPDHHVPNNANVTAVLWNPSIRKSVAIDVPN--VKNEACT 234
           H+  +VGS  G+ CL  SY HP            +LWNPSIRK   +      +K    T
Sbjct: 83  HYFSVVGSCDGILCLV-SYRHP-----------VILWNPSIRKFAKLPYLENPIKGGCYT 130

Query: 233 TLGFGVCPITSDPKIVKI-SHIWGRTEKTDVYTLSPNIEVYTLSSGEWRTPSCNLP 69
           T GFG  P+T + K+V + +H+ G             ++V+TL +  WRT   + P
Sbjct: 131 TYGFGYVPLTGNYKVVTVFNHVSGNGPN------KAKLKVHTLGTNNWRTIEGDFP 180


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