BLASTX nr result
ID: Atractylodes21_contig00031070
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00031070
(322 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
emb|CBI18516.3| unnamed protein product [Vitis vinifera] 120 2e-25
emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera] 120 2e-25
dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana] 113 1e-23
ref|NP_200395.2| pentatricopeptide repeat-containing protein [Ar... 113 1e-23
>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 120 bits (300), Expect = 2e-25
Identities = 57/103 (55%), Positives = 71/103 (68%)
Frame = +3
Query: 3 DVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLC 182
D V YN LLAE CKSGN+ AV L MV NNV+PDS+TY+ LL LC+KGK V+A+ L
Sbjct: 1403 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 1462
Query: 183 EKWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEG 311
+G L PNHV YTC +DGL K G PKAA ++ E+M+ +G
Sbjct: 1463 GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 1505
Score = 56.2 bits (134), Expect = 3e-06
Identities = 35/104 (33%), Positives = 50/104 (48%)
Frame = +3
Query: 6 VVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLCE 185
+V YN LL CK G +AA+ L+ M+ + D TY + +LC + A LL +
Sbjct: 1019 IVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLK 1078
Query: 186 KWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEGLS 317
K +K + PN VTY I+G K G+ A +M LS
Sbjct: 1079 KM-RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLS 1121
>emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 120 bits (300), Expect = 2e-25
Identities = 57/103 (55%), Positives = 71/103 (68%)
Frame = +3
Query: 3 DVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLC 182
D V YN LLAE CKSGN+ AV L MV NNV+PDS+TY+ LL LC+KGK V+A+ L
Sbjct: 535 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 594
Query: 183 EKWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEG 311
+G L PNHV YTC +DGL K G PKAA ++ E+M+ +G
Sbjct: 595 GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 637
Score = 56.2 bits (134), Expect = 3e-06
Identities = 35/104 (33%), Positives = 50/104 (48%)
Frame = +3
Query: 6 VVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLCE 185
+V YN LL CK G +AA+ L+ M+ + D TY + +LC + A LL +
Sbjct: 268 IVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLK 327
Query: 186 KWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEGLS 317
K +K + PN VTY I+G K G+ A +M LS
Sbjct: 328 KM-RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLS 370
>emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 120 bits (300), Expect = 2e-25
Identities = 57/103 (55%), Positives = 71/103 (68%)
Frame = +3
Query: 3 DVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLC 182
D V YN LLAE CKSGN+ AV L MV NNV+PDS+TY+ LL LC+KGK V+A+ L
Sbjct: 652 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 711
Query: 183 EKWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEG 311
+G L PNHV YTC +DGL K G PKAA ++ E+M+ +G
Sbjct: 712 GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 754
Score = 56.2 bits (134), Expect = 3e-06
Identities = 35/104 (33%), Positives = 50/104 (48%)
Frame = +3
Query: 6 VVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLCE 185
+V YN LL CK G +AA+ L+ M+ + D TY + +LC + A LL +
Sbjct: 268 IVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLK 327
Query: 186 KWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEGLS 317
K +K + PN VTY I+G K G+ A +M LS
Sbjct: 328 KM-RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLS 370
>dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 113 bits (283), Expect = 1e-23
Identities = 51/99 (51%), Positives = 71/99 (71%)
Frame = +3
Query: 3 DVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLC 182
D V YN LL +CKSGN+ AV L +MV +++PDS+TYT L++ LC+KGK V AIL
Sbjct: 612 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 671
Query: 183 EKWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKM 299
++ +G +LPN V YTCF+DG+FK GQ KA +++ E+M
Sbjct: 672 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 710
Score = 65.1 bits (157), Expect = 6e-09
Identities = 37/105 (35%), Positives = 54/105 (51%)
Frame = +3
Query: 3 DVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLC 182
DV YNML+ ++C+S + LL+DM + P+ TY L+ +GK++ A L
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 321
Query: 183 EKWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEGLS 317
+ G L PNHVT+ IDG G K A+ M A+GL+
Sbjct: 322 NEMLSFG-LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Score = 55.8 bits (133), Expect = 4e-06
Identities = 35/104 (33%), Positives = 50/104 (48%)
Frame = +3
Query: 6 VVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLCE 185
+V YN +L CK G +AA+ LL M V D TY L+ LC+ ++ LL
Sbjct: 228 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 287
Query: 186 KWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEGLS 317
+K + PN VTY I+G G+ A +M++ GLS
Sbjct: 288 D-MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330
Score = 55.1 bits (131), Expect = 6e-06
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +3
Query: 9 VAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSA-ILLCE 185
+ Y ++ +CK+G + AV LL +M + + PD TY+ L+ CK G+ +A ++C
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 186 KWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEG 311
+ + L PN + Y+ I ++G K A+ +E M+ EG
Sbjct: 464 IY--RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
>ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 113 bits (283), Expect = 1e-23
Identities = 51/99 (51%), Positives = 71/99 (71%)
Frame = +3
Query: 3 DVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLC 182
D V YN LL +CKSGN+ AV L +MV +++PDS+TYT L++ LC+KGK V AIL
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
Query: 183 EKWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKM 299
++ +G +LPN V YTCF+DG+FK GQ KA +++ E+M
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 750
Score = 65.1 bits (157), Expect = 6e-09
Identities = 37/105 (35%), Positives = 54/105 (51%)
Frame = +3
Query: 3 DVVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLC 182
DV YNML+ ++C+S + LL+DM + P+ TY L+ +GK++ A L
Sbjct: 302 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 361
Query: 183 EKWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEGLS 317
+ G L PNHVT+ IDG G K A+ M A+GL+
Sbjct: 362 NEMLSFG-LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Score = 55.8 bits (133), Expect = 4e-06
Identities = 35/104 (33%), Positives = 50/104 (48%)
Frame = +3
Query: 6 VVAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSAILLCE 185
+V YN +L CK G +AA+ LL M V D TY L+ LC+ ++ LL
Sbjct: 268 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 327
Query: 186 KWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEGLS 317
+K + PN VTY I+G G+ A +M++ GLS
Sbjct: 328 D-MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 370
Score = 55.1 bits (131), Expect = 6e-06
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +3
Query: 9 VAYNMLLAEICKSGNVQAAVFLLKDMVHNNVIPDSHTYTCLLASLCKKGKMVSA-ILLCE 185
+ Y ++ +CK+G + AV LL +M + + PD TY+ L+ CK G+ +A ++C
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 186 KWTQKGALLPNHVTYTCFIDGLFKVGQPKAAVFYHEKMVAEG 311
+ + L PN + Y+ I ++G K A+ +E M+ EG
Sbjct: 504 IY--RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543