BLASTX nr result

ID: Atractylodes21_contig00031038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031038
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537017.1| PREDICTED: structural maintenance of chromos...    87   2e-15
ref|XP_003542420.1| PREDICTED: structural maintenance of chromos...    86   3e-15
ref|XP_002273034.2| PREDICTED: structural maintenance of chromos...    82   5e-14
emb|CBI37123.3| unnamed protein product [Vitis vinifera]               82   5e-14
emb|CAD59409.1| SMC1 protein [Oryza sativa]                            81   8e-14

>ref|XP_003537017.1| PREDICTED: structural maintenance of chromosomes protein 1A-like
            [Glycine max]
          Length = 1216

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/51 (80%), Positives = 48/51 (94%)
 Frame = +3

Query: 3    QELLEGNGFQSIVISLKDSFYNKADALVGVYRDSERGCSRALTFNLTKYRK 155
            Q++  GNGFQSIVISLKD+FY+KA+ALVGVYRDSERGCSR LTF+LTKYR+
Sbjct: 1165 QDVDGGNGFQSIVISLKDTFYDKAEALVGVYRDSERGCSRTLTFDLTKYRE 1215


>ref|XP_003542420.1| PREDICTED: structural maintenance of chromosomes protein 1A-like
            [Glycine max]
          Length = 1216

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/46 (86%), Positives = 45/46 (97%)
 Frame = +3

Query: 18   GNGFQSIVISLKDSFYNKADALVGVYRDSERGCSRALTFNLTKYRK 155
            GNGFQSIVISLKD+FY+KA+ALVGVYRDSERGCSR LTF+LTKYR+
Sbjct: 1170 GNGFQSIVISLKDTFYDKAEALVGVYRDSERGCSRTLTFDLTKYRE 1215


>ref|XP_002273034.2| PREDICTED: structural maintenance of chromosomes protein 1A-like
            [Vitis vinifera]
          Length = 1309

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/46 (82%), Positives = 44/46 (95%)
 Frame = +3

Query: 18   GNGFQSIVISLKDSFYNKADALVGVYRDSERGCSRALTFNLTKYRK 155
            G+GFQSIVISLKDSFY+KA+ALVGVYRDS+RGCSR LTF+LT YR+
Sbjct: 1263 GSGFQSIVISLKDSFYDKAEALVGVYRDSDRGCSRTLTFDLTNYRE 1308


>emb|CBI37123.3| unnamed protein product [Vitis vinifera]
          Length = 2295

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/46 (82%), Positives = 44/46 (95%)
 Frame = +3

Query: 18   GNGFQSIVISLKDSFYNKADALVGVYRDSERGCSRALTFNLTKYRK 155
            G+GFQSIVISLKDSFY+KA+ALVGVYRDS+RGCSR LTF+LT YR+
Sbjct: 2249 GSGFQSIVISLKDSFYDKAEALVGVYRDSDRGCSRTLTFDLTNYRE 2294


>emb|CAD59409.1| SMC1 protein [Oryza sativa]
          Length = 1264

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = +3

Query: 18   GNGFQSIVISLKDSFYNKADALVGVYRDSERGCSRALTFNLTKYRK 155
            G GFQSIVISLKDSFY+KA+ALVGVYRDSER CSR LTF+LTKYR+
Sbjct: 1218 GCGFQSIVISLKDSFYDKAEALVGVYRDSERSCSRTLTFDLTKYRE 1263


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