BLASTX nr result

ID: Atractylodes21_contig00031023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031023
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    50   7e-09
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    49   6e-07
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    49   1e-06
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    48   2e-06

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 50.1 bits (118), Expect(2) = 7e-09
 Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = +3

Query: 48   FWSLR*WQSEDEIFV-QRKYAANLLKKFNLANCEISTPLMNINERFQ 185
            F  L   Q +D IF+ Q+KYA +LLKKF + NCE++T  MNINE+ Q
Sbjct: 1049 FLGLEVIQDKDGIFISQKKYAEDLLKKFQMMNCEVATTPMNINEKLQ 1095



 Score = 34.7 bits (78), Expect(2) = 7e-09
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +2

Query: 2    MMRKFEITDLHLLKYFLELEVM 67
            MMR FE++DL LLKYFL LEV+
Sbjct: 1034 MMRNFEMSDLGLLKYFLGLEVI 1055


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 49.3 bits (116), Expect(2) = 6e-07
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +3

Query: 42   NIFWSLR*WQSEDEIFV-QRKYAANLLKKFNLANCEISTPLMNINERFQHE 191
            + F  L   Q ED +FV QRKYA +LLKKFN+ NC++    MN NE+ Q E
Sbjct: 896  HFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVVATPMNSNEKLQAE 946



 Score = 28.9 bits (63), Expect(2) = 6e-07
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 2   MMRKFEITDLHLLKYFLELEV 64
           M +KFE++DL LL +FL LEV
Sbjct: 883 MKKKFEMSDLGLLHFFLGLEV 903


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +3

Query: 42   NIFWSLR*WQSEDEIFV-QRKYAANLLKKFNLANCEISTPLMNINERFQHE 191
            + F  L   Q ED +FV QRKYA +LLKKFN+ NC++    MN NE+ Q E
Sbjct: 1147 HFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVVAIPMNSNEKLQAE 1197



 Score = 28.9 bits (63), Expect(2) = 1e-06
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 2    MMRKFEITDLHLLKYFLELEV 64
            M +KFE++DL LL +FL LEV
Sbjct: 1134 MKKKFEMSDLGLLHFFLGLEV 1154


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
 Frame = +3

Query: 42   NIFWSLR*WQSEDEIFV-QRKYAANLLKKFNLANCEISTPLMNINERFQHE 191
            + F  L   Q ED +FV QRKY  +LLKKFN+ NC++    MN NE+ Q E
Sbjct: 976  HFFLXLEVKQVEDGVFVSQRKYXVDLLKKFNMLNCKVVATXMNSNEKLQAE 1026



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +2

Query: 2    MMRKFEITDLHLLKYFLELEV 64
            M +KFE+++L LL +FL LEV
Sbjct: 963  MKKKFEMSBLGLLHFFLXLEV 983


Top