BLASTX nr result

ID: Atractylodes21_contig00030355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030355
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
emb|CBI24516.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002328242.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002312829.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_004160885.1| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11

>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Vitis vinifera]
          Length = 1101

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/91 (57%), Positives = 65/91 (71%)
 Frame = -3

Query: 275 DMAYSIYIIGLCMGGKSDDALRSAIFMINLGFQPLLSAYNSLIKSSCQEGFVEHAKALVE 96
           D+A+ I+I  LC  GK+D AL     M++LG +PLLS YNSLIK   QE  VE AK+L++
Sbjct: 479 DVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLID 538

Query: 95  LMEDMGTVPDSTTYLVMVCEHCKRGDLASAF 3
           LM++ G VPD  TYL+MV EHC  GDLASAF
Sbjct: 539 LMQENGIVPDLATYLIMVHEHCNHGDLASAF 569


>emb|CBI24516.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/91 (57%), Positives = 65/91 (71%)
 Frame = -3

Query: 275 DMAYSIYIIGLCMGGKSDDALRSAIFMINLGFQPLLSAYNSLIKSSCQEGFVEHAKALVE 96
           D+A+ I+I  LC  GK+D AL     M++LG +PLLS YNSLIK   QE  VE AK+L++
Sbjct: 359 DVAFGIFISALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLID 418

Query: 95  LMEDMGTVPDSTTYLVMVCEHCKRGDLASAF 3
           LM++ G VPD  TYL+MV EHC  GDLASAF
Sbjct: 419 LMQENGIVPDLATYLIMVHEHCNHGDLASAF 449


>ref|XP_002328242.1| predicted protein [Populus trichocarpa] gi|222837757|gb|EEE76122.1|
           predicted protein [Populus trichocarpa]
          Length = 893

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/91 (47%), Positives = 60/91 (65%)
 Frame = -3

Query: 275 DMAYSIYIIGLCMGGKSDDALRSAIFMINLGFQPLLSAYNSLIKSSCQEGFVEHAKALVE 96
           ++A  IY+  LC GGK++ AL     M+N G  PLL  +NSLIK   Q+G  E  K+L+E
Sbjct: 480 NVAGGIYVSALCEGGKTESALDCLENMVNAGCVPLLFTFNSLIKRLFQDGLSEDVKSLIE 539

Query: 95  LMEDMGTVPDSTTYLVMVCEHCKRGDLASAF 3
           +M++ G  P+  TYL+MV E+CK+ DLA AF
Sbjct: 540 IMQNWGISPNLETYLIMVNEYCKQEDLALAF 570


>ref|XP_002312829.1| predicted protein [Populus trichocarpa] gi|222849237|gb|EEE86784.1|
           predicted protein [Populus trichocarpa]
          Length = 734

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/91 (46%), Positives = 61/91 (67%)
 Frame = -3

Query: 275 DMAYSIYIIGLCMGGKSDDALRSAIFMINLGFQPLLSAYNSLIKSSCQEGFVEHAKALVE 96
           ++A SIY+  LC  GK++ AL     + + G  PLL  +NSLIK   Q+G  E  K+L++
Sbjct: 384 NVAGSIYVSALCEDGKTETALACFKNVASAGCIPLLFTFNSLIKRLFQDGLFEDVKSLMD 443

Query: 95  LMEDMGTVPDSTTYLVMVCEHCKRGDLASAF 3
           +M++ G VP+  TYL+MV E+CK+ DLASAF
Sbjct: 444 IMQNEGIVPNLETYLIMVNEYCKQEDLASAF 474


>ref|XP_004160885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Cucumis sativus]
          Length = 693

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/90 (40%), Positives = 58/90 (64%)
 Frame = -3

Query: 272 MAYSIYIIGLCMGGKSDDALRSAIFMINLGFQPLLSAYNSLIKSSCQEGFVEHAKALVEL 93
           +A+SI I  LC       AL     M++LG +PLL  YNSLI+  C+E   E A +L++ 
Sbjct: 468 VAFSIVISALCETENFCYALDYLHNMVSLGCKPLLFTYNSLIRRLCKERLFEDAMSLIDH 527

Query: 92  MEDMGTVPDSTTYLVMVCEHCKRGDLASAF 3
           M+D    P++TTYL++V E+C++G++ +A+
Sbjct: 528 MKDYSLFPNTTTYLIIVNEYCRQGNVTAAY 557


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