BLASTX nr result

ID: Atractylodes21_contig00030308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030308
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD56957.1|AF187103_1 LIM domain protein PLIM1b [Helianthus a...   127   1e-27
sp|P29675.1|SF3_HELAN RecName: Full=Pollen-specific protein SF3 ...   127   1e-27
gb|AAD02543.1| PGPS/D1 [Petunia x hybrida]                            119   3e-25
gb|AAD56950.1|AF184885_1 LIM domain protein PLIM1 [Nicotiana tab...   119   3e-25
gb|AAF13231.1| pollen specific LIM domain protein 1a [Nicotiana ...   119   3e-25

>gb|AAD56957.1|AF187103_1 LIM domain protein PLIM1b [Helianthus annuus]
          Length = 214

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/64 (85%), Positives = 59/64 (92%)
 Frame = -1

Query: 208 KVKVDGAAYHRSCFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFREKGNYSQLETEELV 29
           +VKVDG AYHR+CFKC HGGCTISPSNYIAHEGRLYCKHHHIQLF++KGNYSQLE EE V
Sbjct: 122 RVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLEVEETV 181

Query: 28  APPA 17
           A PA
Sbjct: 182 AAPA 185


>sp|P29675.1|SF3_HELAN RecName: Full=Pollen-specific protein SF3
           gi|5932434|gb|AAD56958.1|AF187104_1 LIM domain protein
           PLIM1a [Helianthus annuus] gi|18819|emb|CAA45731.1|
           Transcription factor SF3 [Helianthus annuus]
          Length = 219

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/64 (85%), Positives = 59/64 (92%)
 Frame = -1

Query: 208 KVKVDGAAYHRSCFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFREKGNYSQLETEELV 29
           +VKVDG AYHR+CFKC HGGCTISPSNYIAHEGRLYCKHHHIQLF++KGNYSQLE EE V
Sbjct: 122 RVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLEVEETV 181

Query: 28  APPA 17
           A PA
Sbjct: 182 AAPA 185


>gb|AAD02543.1| PGPS/D1 [Petunia x hybrida]
          Length = 195

 Score =  119 bits (297), Expect = 3e-25
 Identities = 50/57 (87%), Positives = 56/57 (98%)
 Frame = -1

Query: 208 KVKVDGAAYHRSCFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFREKGNYSQLETE 38
           KV V+GAAYH++CFKC+HGGCTISPSNYIAHEGRLYCKHHHIQLF+EKGNYSQLE+E
Sbjct: 122 KVSVNGAAYHKACFKCTHGGCTISPSNYIAHEGRLYCKHHHIQLFKEKGNYSQLESE 178


>gb|AAD56950.1|AF184885_1 LIM domain protein PLIM1 [Nicotiana tabacum]
          Length = 191

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/69 (73%), Positives = 58/69 (84%)
 Frame = -1

Query: 208 KVKVDGAAYHRSCFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFREKGNYSQLETEELV 29
           KV V+G AYH++CFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLF+EKGNYSQLE++   
Sbjct: 122 KVSVNGTAYHKACFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFKEKGNYSQLESDHET 181

Query: 28  APPACLQPI 2
            P    Q +
Sbjct: 182 DPALSTQSL 190


>gb|AAF13231.1| pollen specific LIM domain protein 1a [Nicotiana tabacum]
          Length = 191

 Score =  119 bits (297), Expect = 3e-25
 Identities = 51/69 (73%), Positives = 58/69 (84%)
 Frame = -1

Query: 208 KVKVDGAAYHRSCFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFREKGNYSQLETEELV 29
           KV V+G AYH++CFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLF+EKGNYSQLE++   
Sbjct: 122 KVSVNGTAYHKACFKCSHGGCTISPSNYIAHEGRLYCKHHHIQLFKEKGNYSQLESDHET 181

Query: 28  APPACLQPI 2
            P    Q +
Sbjct: 182 DPALSTQSL 190


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