BLASTX nr result

ID: Atractylodes21_contig00030251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030251
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525140.1| ring finger protein, putative [Ricinus commu...   115   3e-24
emb|CBI21948.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   114   6e-24
ref|XP_002325584.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_002316839.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17

>ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
           gi|223535599|gb|EEF37267.1| ring finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  115 bits (289), Expect = 3e-24
 Identities = 69/142 (48%), Positives = 83/142 (58%)
 Frame = -3

Query: 426 DRAGLNQECAVCLSMFEDGQMIRVLPNCKHHFHAECIDKWLGGQSTCPICRHEVEPGSAI 247
           D+   +QECAVCLS+ +D +M R LPNCKH FHAECIDKWL   STCPICR E EP   I
Sbjct: 119 DQEDNDQECAVCLSVLQDQEMARSLPNCKHTFHAECIDKWLTSHSTCPICRTEAEP--RI 176

Query: 246 LPLPREPTTRLGSDPPSAPPMERTGSISIAMEGTSDEMVQSSAKLVNGXXXXXXXXXXXX 67
            P PRE     G    +APP+E+ G+     EGTS+   QSS+   +G            
Sbjct: 177 QPEPREGPVPAGG-AATAPPLEQVGT-----EGTSESGNQSSSNKASG-SISRLSSFRRI 229

Query: 66  XXXXRPSQRIHSCTQEDGIEDL 1
               R S+RI S TQE G+EDL
Sbjct: 230 LSRERSSRRIQSETQEQGLEDL 251


>emb|CBI21948.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  114 bits (286), Expect = 6e-24
 Identities = 67/142 (47%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
 Frame = -3

Query: 417 GLNQECAVCLSMFEDGQMIRVLPNCKHHFHAECIDKWLGGQSTCPICRHEVEPGSAILPL 238
           G   +CAVCLS+ E+G++ R+LPNCKH FHAECIDKWLG  STCPICR E EP   + P 
Sbjct: 36  GGTTDCAVCLSVLEEGEIARLLPNCKHTFHAECIDKWLGTHSTCPICRTEAEP--RLQPE 93

Query: 237 PREPTTRLGSDPPS-APPMERTGSISIA-MEGTSDEMVQSSAKLVNGXXXXXXXXXXXXX 64
           PRE    + + PP+ APP + T S S+A  EGTS+   Q SAK                 
Sbjct: 94  PREAMVMIRTVPPAPAPPSDGTNSSSLACSEGTSEGAAQCSAK---SGASTSRLSSFRRM 150

Query: 63  XXXRPSQRIHSC-TQEDGIEDL 1
                S+   SC   EDGIED+
Sbjct: 151 LSRGSSRTTQSCGAPEDGIEDV 172


>ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
          Length = 247

 Score =  114 bits (286), Expect = 6e-24
 Identities = 67/142 (47%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
 Frame = -3

Query: 417 GLNQECAVCLSMFEDGQMIRVLPNCKHHFHAECIDKWLGGQSTCPICRHEVEPGSAILPL 238
           G   +CAVCLS+ E+G++ R+LPNCKH FHAECIDKWLG  STCPICR E EP   + P 
Sbjct: 108 GGTTDCAVCLSVLEEGEIARLLPNCKHTFHAECIDKWLGTHSTCPICRTEAEP--RLQPE 165

Query: 237 PREPTTRLGSDPPS-APPMERTGSISIA-MEGTSDEMVQSSAKLVNGXXXXXXXXXXXXX 64
           PRE    + + PP+ APP + T S S+A  EGTS+   Q SAK                 
Sbjct: 166 PREAMVMIRTVPPAPAPPSDGTNSSSLACSEGTSEGAAQCSAK---SGASTSRLSSFRRM 222

Query: 63  XXXRPSQRIHSC-TQEDGIEDL 1
                S+   SC   EDGIED+
Sbjct: 223 LSRGSSRTTQSCGAPEDGIEDV 244


>ref|XP_002325584.1| predicted protein [Populus trichocarpa] gi|222862459|gb|EEE99965.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 38/49 (77%), Positives = 40/49 (81%)
 Frame = -3

Query: 405 ECAVCLSMFEDGQMIRVLPNCKHHFHAECIDKWLGGQSTCPICRHEVEP 259
           ECAVCLSM ED +M R+LPNCKH FHAECIDKWL   STCPICR E EP
Sbjct: 31  ECAVCLSMLEDQEMARILPNCKHKFHAECIDKWLSSHSTCPICRTEAEP 79


>ref|XP_002316839.1| predicted protein [Populus trichocarpa] gi|222859904|gb|EEE97451.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/97 (48%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
 Frame = -3

Query: 405 ECAVCLSMFEDGQMIRVLPNCKHHFHAECIDKWLGGQSTCPICRHEVEPGSAILPLPREP 226
           EC++CL    +G  +RVLPNCKH FH ECID WLG  STCPICR + EP   ++    E 
Sbjct: 102 ECSICLGTIVEGDTVRVLPNCKHTFHVECIDMWLGSHSTCPICRTDAEP---MIQPAGEK 158

Query: 225 TTRLGSDPPSAPPMERT---GSISIAMEGTSDEMVQS 124
               G++ PSAPP+E     G   I  EG SD  V S
Sbjct: 159 AMNSGAE-PSAPPIEENMVHGGDQIEKEGGSDLRVTS 194


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