BLASTX nr result

ID: Atractylodes21_contig00030207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030207
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320208.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002301420.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002518880.1| zinc finger protein, putative [Ricinus commu...    85   7e-15
ref|XP_002299441.1| f-box family protein [Populus trichocarpa] g...    84   2e-14
ref|XP_002275610.1| PREDICTED: dof zinc finger protein DOF4.6-li...    80   2e-13

>ref|XP_002320208.1| predicted protein [Populus trichocarpa] gi|222860981|gb|EEE98523.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/107 (45%), Positives = 67/107 (62%)
 Frame = -3

Query: 387 VSAQDLISTGTISGGLNSFNTSTMLDSNAMFNRPGFNLQEYKPTMGFPFHDNGIKYGGFQ 208
           +SA +L+ +G  S GLN+F  + M DSN +++  GF LQE +PT+ FP    G +YG   
Sbjct: 158 ISAMELLRSGFASRGLNTFIPTPMPDSNTLYSSGGFPLQELRPTLSFPADGLGSRYG--- 214

Query: 207 EYQEDDGRIILPFGVMNQQLSSARESGQNMGQGDSTGYWNGTLGGRS 67
             QE+ GR++ PFG + Q  S+  E  QN GQG S+GYWNG  GG S
Sbjct: 215 -IQENSGRLLFPFGELKQLSSTTSEVDQNKGQGGSSGYWNGMFGGGS 260


>ref|XP_002301420.1| predicted protein [Populus trichocarpa] gi|222843146|gb|EEE80693.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
 Frame = -3

Query: 381 AQDLISTGTISGGLNSFNTSTMLDSNAMFNRPGFNLQEYKPTMGFPFHDNGIKYGGFQEY 202
           A +L+ +G  S GLNSF  + M DSN +++  GF LQE KPT+ F     G +YG     
Sbjct: 127 ALELLRSGIASRGLNSFIPTPMPDSNTLYSSGGFPLQELKPTLSFSLDGLGSRYG----V 182

Query: 201 QEDDGRIILPFGVMNQQLSSARESGQNMGQG-DSTGYWNGTLGGRS 67
           QE +GR++ PFG + +QLSS  E  QN GQG  STGYWNG  GG S
Sbjct: 183 QEHNGRLLFPFGEL-KQLSSTNEVDQNKGQGTSSTGYWNGMFGGGS 227


>ref|XP_002518880.1| zinc finger protein, putative [Ricinus communis]
           gi|223541867|gb|EEF43413.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 306

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/107 (42%), Positives = 63/107 (58%)
 Frame = -3

Query: 393 TSVSAQDLISTGTISGGLNSFNTSTMLDSNAMFNRPGFNLQEYKPTMGFPFHDNGIKYGG 214
           + +SA +L+ TG  S GLNSF    + D N+++   GF LQ++KPT+ F     G  YG 
Sbjct: 197 SQLSALELL-TGISSRGLNSFMPMPVQDPNSVYTS-GFPLQDFKPTLNFSLDGLGSGYGS 254

Query: 213 FQEYQEDDGRIILPFGVMNQQLSSARESGQNMGQGDSTGYWNGTLGG 73
            Q  QE  GR++ PF  + Q  S++ +  QN  QGDS GYW G LGG
Sbjct: 255 LQGVQETGGRLLFPFEDLKQVSSTSTDIEQNREQGDSAGYWTGMLGG 301


>ref|XP_002299441.1| f-box family protein [Populus trichocarpa]
           gi|222846699|gb|EEE84246.1| f-box family protein
           [Populus trichocarpa]
          Length = 247

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/99 (44%), Positives = 56/99 (56%)
 Frame = -3

Query: 363 TGTISGGLNSFNTSTMLDSNAMFNRPGFNLQEYKPTMGFPFHDNGIKYGGFQEYQEDDGR 184
           TG  S GLNSF      D + ++   GF LQ++KPT+ F     G  YG  Q   E +GR
Sbjct: 149 TGISSRGLNSFPMPVHQDPSTLYPS-GFPLQDFKPTLSFSLDGLGSGYGDLQGVHETNGR 207

Query: 183 IILPFGVMNQQLSSARESGQNMGQGDSTGYWNGTLGGRS 67
           ++ PF  + QQ+SS  +  QN   GDSTGYW G LGG S
Sbjct: 208 LLFPFEDLKQQVSSTADIEQNKEHGDSTGYWTGMLGGGS 246


>ref|XP_002275610.1| PREDICTED: dof zinc finger protein DOF4.6-like [Vitis vinifera]
          Length = 287

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
 Frame = -3

Query: 387 VSAQDLI-STGTISGGLNSFNTSTMLDSNAMFNRPGFNLQEYKPTMGFPFHDNGIKYGGF 211
           +SA +L+ STG  S GL SF   ++ DSN++++  GF LQE+KPT+ F        YG  
Sbjct: 180 LSAMELLKSTGIASRGLGSFMPMSVSDSNSIYSS-GFPLQEFKPTLNFSLDGFQSGYGSL 238

Query: 210 QEYQEDDGRIILPFGVMNQQLSSARESGQNMG-QGDSTGYWNGTLGGRS 67
           Q  QE   R++ P   + +Q+S+  E  Q+ G QGDS GYWNG LGG S
Sbjct: 239 QGVQESGARLLFPLEDL-KQVSNTTEFEQSRGVQGDSAGYWNGMLGGGS 286