BLASTX nr result

ID: Atractylodes21_contig00030040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030040
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vi...    55   6e-06
emb|CBI23849.3| unnamed protein product [Vitis vinifera]               55   6e-06
ref|XP_002266923.1| PREDICTED: TMV resistance protein N-like [Vi...    55   8e-06
ref|XP_002531928.1| leucine-rich repeat-containing protein, puta...    54   1e-05

>ref|XP_002272667.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1261

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = -3

Query: 369  VVPGSKIPSWFKEQQHGCDVALRLPPK-LDTQVMGFAICGVFHDD-WQYDCPRIVFRIVN 196
            VVPGS IP WF +Q  GC V + LPP    T++MG A+C VFH +       R  +  +N
Sbjct: 1095 VVPGSSIPEWFTDQSLGCSVTVELPPHWCTTRLMGLAVCFVFHPNIGMGKFGRSEYFSMN 1154

Query: 195  DEKGVPKSEVDTAAYEAADNCNLWVTYIP 109
            +  G       +  +  AD  ++W  Y P
Sbjct: 1155 ESGGFSLHNTASTHFSKAD--HIWFGYRP 1181


>emb|CBI23849.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = -3

Query: 369 VVPGSKIPSWFKEQQHGCDVALRLPPK-LDTQVMGFAICGVFHDD-WQYDCPRIVFRIVN 196
           VVPGS IP WF +Q  GC V + LPP    T++MG A+C VFH +       R  +  +N
Sbjct: 702 VVPGSSIPEWFTDQSLGCSVTVELPPHWCTTRLMGLAVCFVFHPNIGMGKFGRSEYFSMN 761

Query: 195 DEKGVPKSEVDTAAYEAADNCNLWVTYIP 109
           +  G       +  +  AD  ++W  Y P
Sbjct: 762 ESGGFSLHNTASTHFSKAD--HIWFGYRP 788


>ref|XP_002266923.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1179

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = -3

Query: 477  DCHKLLQDQENGQYIDKMLQQSFLKKCATVDHQLSIVVPGSKIPSWFKEQQHGCDVALRL 298
            +C  L QD  NG  I + L+Q+FL +      + SIV+PGS IP WF+    G  V + L
Sbjct: 971  NCFALAQD--NGATILEKLRQNFLPEI-----EYSIVLPGSTIPEWFQHPSIGSSVTIEL 1023

Query: 297  PPKL-DTQVMGFAICGVF 247
            PP   +   +GFA+C VF
Sbjct: 1024 PPNWHNKDFLGFALCSVF 1041


>ref|XP_002531928.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223528407|gb|EEF30442.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 943

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -3

Query: 483 FIDCHKLLQDQENGQYIDKMLQQSFLKKCATVDHQLSIVVPGSKIPSWFKEQQHG-CDVA 307
           F +C KL+++Q     I  M+ +++L+  +       I++PGS+IP W   Q  G C ++
Sbjct: 699 FTNCFKLVENQGCNN-IGFMMLRNYLQGLSNPKPGFDIIIPGSEIPDWLSHQSLGDCSIS 757

Query: 306 LRLPPK-LDTQVMGFAICGVF 247
           + LPP   D++ MGFA+C V+
Sbjct: 758 IELPPVWCDSKWMGFALCAVY 778


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