BLASTX nr result

ID: Atractylodes21_contig00030008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00030008
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    60   2e-16
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]    60   2e-16
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    65   5e-16
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]    57   1e-15
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    63   4e-15

>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 59.7 bits (143), Expect(2) = 2e-16
 Identities = 28/59 (47%), Positives = 41/59 (69%)
 Frame = +1

Query: 316  NGLVKRFNRTILERMRRLLISANLPKVFWAKALSIAVYLMNRCPSIAIGMKTREELRIG 492
            NG+ +R N+T+++R R + I A L K FWA+A++ A YL+NR PS AI  KT +E+  G
Sbjct: 905  NGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSG 963



 Score = 50.8 bits (120), Expect(2) = 2e-16
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = +2

Query: 128 SCKLWVYIKRLRIETFGNVKS*KALVEKQTGKLVKVVMF*SSFFRIGNGLKFFSEQFNVY 307
           S K+WVY  + + E FG  K  K +VEK+TGK+VK +       R  NGL+F ++ F+ +
Sbjct: 834 SRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTL-------RTDNGLEFCNKDFDEF 886

Query: 308 CK 313
           C+
Sbjct: 887 CR 888


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score = 59.7 bits (143), Expect(2) = 2e-16
 Identities = 28/59 (47%), Positives = 41/59 (69%)
 Frame = +1

Query: 316 NGLVKRFNRTILERMRRLLISANLPKVFWAKALSIAVYLMNRCPSIAIGMKTREELRIG 492
           NG+ +R N+T+++R R + I A L K FWA+A++ A YL+NR PS AI  KT +E+  G
Sbjct: 692 NGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSG 750



 Score = 50.8 bits (120), Expect(2) = 2e-16
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = +2

Query: 128 SCKLWVYIKRLRIETFGNVKS*KALVEKQTGKLVKVVMF*SSFFRIGNGLKFFSEQFNVY 307
           S K+WVY  + + E FG  K  K +VEK+TGK+VK +       R  NGL+F ++ F+ +
Sbjct: 621 SRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTL-------RTDNGLEFCNKDFDEF 673

Query: 308 CK 313
           C+
Sbjct: 674 CR 675


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 65.1 bits (157), Expect(2) = 5e-16
 Identities = 32/55 (58%), Positives = 41/55 (74%)
 Frame = +1

Query: 316 NGLVKRFNRTILERMRRLLISANLPKVFWAKALSIAVYLMNRCPSIAIGMKTREE 480
           NGL +R NRTILER+R +L S+ L KVFWA+A   AV+L+NR PS A+  KT +E
Sbjct: 551 NGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLINRSPSSALQFKTPQE 605



 Score = 43.9 bits (102), Expect(2) = 5e-16
 Identities = 25/62 (40%), Positives = 33/62 (53%)
 Frame = +2

Query: 128 SCKLWVYIKRLRIETFGNVKS*KALVEKQTGKLVKVVMF*SSFFRIGNGLKFFSEQFNVY 307
           S K+W+Y  + + ETF   K  K LVE QT + VK +       R  NGL+F S  FN  
Sbjct: 480 SRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKL-------RTDNGLEFLSNDFNSL 532

Query: 308 CK 313
           C+
Sbjct: 533 CQ 534


>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score = 56.6 bits (135), Expect(2) = 1e-15
 Identities = 26/55 (47%), Positives = 38/55 (69%)
 Frame = +1

Query: 316 NGLVKRFNRTILERMRRLLISANLPKVFWAKALSIAVYLMNRCPSIAIGMKTREE 480
           NG+ +R N+T+++R R + I A L K FWA+A++ A YL+N  PS AI  KT +E
Sbjct: 547 NGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLVNXSPSTAIDFKTPQE 601



 Score = 50.8 bits (120), Expect(2) = 1e-15
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = +2

Query: 128 SCKLWVYIKRLRIETFGNVKS*KALVEKQTGKLVKVVMF*SSFFRIGNGLKFFSEQFNVY 307
           S K+WVY  + + E FG  K  K +VEK+TGK+VK +       R  NGL+F ++ F+ +
Sbjct: 476 SRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTL-------RTDNGLEFCNKDFDEF 528

Query: 308 CK 313
           C+
Sbjct: 529 CR 530


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score = 63.2 bits (152), Expect(2) = 4e-15
 Identities = 32/59 (54%), Positives = 41/59 (69%)
 Frame = +1

Query: 316 NGLVKRFNRTILERMRRLLISANLPKVFWAKALSIAVYLMNRCPSIAIGMKTREELRIG 492
           NG+ +R NRTI+ + R LL +A LPK FWA+A+S A YL+NR PS AI  KT  E+  G
Sbjct: 800 NGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSG 858



 Score = 42.7 bits (99), Expect(2) = 4e-15
 Identities = 23/63 (36%), Positives = 35/63 (55%)
 Frame = +2

Query: 128 SCKLWVYIKRLRIETFGNVKS*KALVEKQTGKLVKVVMF*SSFFRIGNGLKFFSEQFNVY 307
           S K+W Y  + + + F   K  K +VE+QT + VK++       R  NG++F S+ F  Y
Sbjct: 729 SRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKIL-------RTDNGMEFCSKIFKSY 781

Query: 308 CKS 316
           CKS
Sbjct: 782 CKS 784


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