BLASTX nr result

ID: Atractylodes21_contig00029472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029472
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321206.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus c...   117   1e-24
ref|XP_002267175.1| PREDICTED: uncharacterized protein LOC100256...   113   2e-23
ref|NP_001234480.1| ribonuclease E [Solanum lycopersicum] gi|166...   111   5e-23
ref|XP_003544280.1| PREDICTED: uncharacterized protein LOC100809...   111   7e-23

>ref|XP_002321206.1| predicted protein [Populus trichocarpa] gi|222861979|gb|EEE99521.1|
           predicted protein [Populus trichocarpa]
          Length = 923

 Score =  121 bits (304), Expect = 5e-26
 Identities = 63/127 (49%), Positives = 82/127 (64%), Gaps = 15/127 (11%)
 Frame = -2

Query: 391 VEILLEPVKNNVQSDSVYLGIVTKFVPHMGGAFVNIGCPRPSLLDINQNWEPFIFPPFRR 212
           VE+LLEPVKN V  DSVY+G+VTK VPHMGGAFVNIG  RPSL+DI QN EPFIFPPF +
Sbjct: 282 VELLLEPVKNTVLCDSVYIGVVTKLVPHMGGAFVNIGSSRPSLMDIKQNREPFIFPPFCQ 341

Query: 211 RKKQRNVSGSLL--------------VSEQAKIINSIENDITDDSVQTMLY-EYREHDTD 77
           R K+  V+GS+L               S   ++I+ +   +    +   L+ ++ EH+ D
Sbjct: 342 RTKKGEVNGSVLKAFEEHPAAHENEHTSHDVEVIDDVSEFVFHSDLAPFLHDDHEEHEVD 401

Query: 76  DELDVSE 56
           D+ DVSE
Sbjct: 402 DDFDVSE 408


>ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus communis]
           gi|223536154|gb|EEF37809.1| hypothetical protein
           RCOM_1213430 [Ricinus communis]
          Length = 963

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/127 (48%), Positives = 86/127 (67%), Gaps = 15/127 (11%)
 Frame = -2

Query: 391 VEILLEPVKNNVQSDSVYLGIVTKFVPHMGGAFVNIGCPRPSLLDINQNWEPFIFPPFRR 212
           VE+LLEPVK NVQ DSVYLG+VTKFVPHMGGAFVNIG  RPSL+DI Q+ EPFIFPPFR+
Sbjct: 297 VELLLEPVKTNVQCDSVYLGVVTKFVPHMGGAFVNIGHSRPSLMDIKQSREPFIFPPFRQ 356

Query: 211 RKKQRNVSGSLL--------------VSEQAKIINSIENDITDDSVQTMLY-EYREHDTD 77
           + K+  ++ S L               S+  + I+ +   I+ + + ++ + ++ EH+ D
Sbjct: 357 KTKKEKMNDSGLDSLEEHQAADGNEHTSQDIEGIDDVAEFISQEDLVSLPHNDHDEHEAD 416

Query: 76  DELDVSE 56
           ++ D+SE
Sbjct: 417 EDFDISE 423


>ref|XP_002267175.1| PREDICTED: uncharacterized protein LOC100256290 [Vitis vinifera]
          Length = 1019

 Score =  113 bits (282), Expect = 2e-23
 Identities = 63/134 (47%), Positives = 83/134 (61%), Gaps = 16/134 (11%)
 Frame = -2

Query: 391 VEILLEPVKNNVQSDSVYLGIVTKFVPHMGGAFVNIGCPRPSLLDINQNWEPFIFPPFRR 212
           VE+LLEPVK+NVQ DSVYLG+VTK VPHMGGAFVNIG  RPSL+DI ++ EPFIFPPF  
Sbjct: 365 VELLLEPVKSNVQCDSVYLGVVTKLVPHMGGAFVNIGSSRPSLMDIKRSREPFIFPPFHH 424

Query: 211 RKKQRNVSGSLL--------------VSEQAKIINSIENDITDDSVQTMLYEYREHDTDD 74
             K+++ +GS+                S   +  +  E D  DD VQ    ++ EH+ +D
Sbjct: 425 GTKEKD-NGSVFNTLRENPIAHENEHTSYDVEADDLREVDFQDDPVQFAHDDFEEHEVED 483

Query: 73  ELDV--SEDFPGKV 38
           + DV   +D  G +
Sbjct: 484 DFDVLIKKDLNGSI 497


>ref|NP_001234480.1| ribonuclease E [Solanum lycopersicum] gi|166203325|gb|ABY84671.1|
           ribonuclease E [Solanum lycopersicum]
          Length = 935

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/126 (45%), Positives = 78/126 (61%), Gaps = 14/126 (11%)
 Frame = -2

Query: 391 VEILLEPVKNNVQSDSVYLGIVTKFVPHMGGAFVNIGCPRPSLLDINQNWEPFIFPPFRR 212
           VE+LLEPVKNNVQ DSVYLG+VTK  PHMGGAFVNIG  RPS +DI  N EPF+FPPF  
Sbjct: 295 VELLLEPVKNNVQCDSVYLGVVTKLAPHMGGAFVNIGTSRPSFMDIKPNREPFVFPPFCH 354

Query: 211 RKKQRNVSGSLL--------------VSEQAKIINSIENDITDDSVQTMLYEYREHDTDD 74
             +++ ++G+ +                E+       + DI D+S++ M  E+ +H++ D
Sbjct: 355 DSREKVINGASVDMLEENLGLPRNKSTLEEVDADEIDDADIEDESMEYMDSEFGDHESGD 414

Query: 73  ELDVSE 56
             D+ E
Sbjct: 415 ACDILE 420


>ref|XP_003544280.1| PREDICTED: uncharacterized protein LOC100809907 [Glycine max]
          Length = 983

 Score =  111 bits (277), Expect = 7e-23
 Identities = 61/131 (46%), Positives = 85/131 (64%), Gaps = 9/131 (6%)
 Frame = -2

Query: 391 VEILLEPVKNNVQSDSVYLGIVTKFVPHMGGAFVNIGCPRPSLLDINQNWEPFIFPPFRR 212
           VE+LLEPVK+NVQ DSVY+G+VTK VPHMGGAFV+IG  R + +DI QN EPFIFPPFR+
Sbjct: 338 VELLLEPVKSNVQCDSVYVGVVTKLVPHMGGAFVSIGNSRSAFMDIKQNKEPFIFPPFRQ 397

Query: 211 RKKQRNV---------SGSLLVSEQAKIINSIENDITDDSVQTMLYEYREHDTDDELDVS 59
           R K++ +         S  + VS+    INS      D  ++++  +Y EH+ DD+  +S
Sbjct: 398 RTKKQEIDLEGKNDHTSHVIDVSDGTSDINS-----EDGCLKSVHNDYDEHEGDDDFYIS 452

Query: 58  EDFPGKVSSAV 26
           E     V+ ++
Sbjct: 453 EVLKENVNGSM 463


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