BLASTX nr result

ID: Atractylodes21_contig00029405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029405
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532505.1| 40S ribosomal protein S11, putative [Ricinus...    61   8e-08
gb|AFX66997.1| 40s ribosomal protein S11 [Solanum tuberosum]           60   2e-07
ref|XP_004138716.1| PREDICTED: 40S ribosomal protein S11-3-like ...    58   7e-07
ref|XP_002325170.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002327018.1| predicted protein [Populus trichocarpa] gi|1...    57   1e-06

>ref|XP_002532505.1| 40S ribosomal protein S11, putative [Ricinus communis]
           gi|223527780|gb|EEF29881.1| 40S ribosomal protein S11,
           putative [Ricinus communis]
          Length = 159

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +2

Query: 2   RPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 91
           RPLSKTVRFNVLKVIPAGSSGGGKKAFTG+
Sbjct: 130 RPLSKTVRFNVLKVIPAGSSGGGKKAFTGM 159


>gb|AFX66997.1| 40s ribosomal protein S11 [Solanum tuberosum]
          Length = 159

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +2

Query: 2   RPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 91
           RPLSKTVRFNVLKVIPAGS GGGKKAFTG+
Sbjct: 130 RPLSKTVRFNVLKVIPAGSGGGGKKAFTGM 159


>ref|XP_004138716.1| PREDICTED: 40S ribosomal protein S11-3-like isoform 2 [Cucumis
           sativus] gi|449493335|ref|XP_004159259.1| PREDICTED: 40S
           ribosomal protein S11-3-like isoform 2 [Cucumis sativus]
          Length = 159

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   RPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 91
           RPLSKTVRFNVLKVIPAGSS GGKKAF GI
Sbjct: 130 RPLSKTVRFNVLKVIPAGSSAGGKKAFAGI 159


>ref|XP_002325170.1| predicted protein [Populus trichocarpa] gi|222866604|gb|EEF03735.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +2

Query: 2   RPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 91
           RPLSKTVRFNVLKVIPAGS+ GGKKAFTG+
Sbjct: 130 RPLSKTVRFNVLKVIPAGSAAGGKKAFTGM 159


>ref|XP_002327018.1| predicted protein [Populus trichocarpa] gi|118481533|gb|ABK92709.1|
           unknown [Populus trichocarpa]
           gi|222835333|gb|EEE73768.1| predicted protein [Populus
           trichocarpa]
          Length = 159

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = +2

Query: 2   RPLSKTVRFNVLKVIPAGSSGGGKKAFTGI 91
           RPLSKTVRFNVLKVIPAGSSGG KK FTG+
Sbjct: 130 RPLSKTVRFNVLKVIPAGSSGGAKKVFTGM 159


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