BLASTX nr result

ID: Atractylodes21_contig00029323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029323
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42721.1| unknown [Lotus japonicus]                              194   5e-48
gb|AFK48034.1| unknown [Lotus japonicus]                              194   6e-48
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox...   191   7e-47
sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox...   191   7e-47
sp|Q42822.1|RBS_GLYTO RecName: Full=Ribulose bisphosphate carbox...   190   9e-47

>gb|AFK42721.1| unknown [Lotus japonicus]
          Length = 182

 Score =  194 bits (494), Expect = 5e-48
 Identities = 85/96 (88%), Positives = 93/96 (96%)
 Frame = +3

Query: 6   REVDYLLRKGWVPCLEFELEKGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSAQVLKEL 185
           +EV+YLLRKGWVPCLEFE EKGFVYRENH+SPGYYDGRYWTMWKLPMFGC+D+AQVLKEL
Sbjct: 87  KEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTMWKLPMFGCSDAAQVLKEL 146

Query: 186 EEAVKAYPNGFIRIIGFDNVRQVQCISFIAHRPPGY 293
           +EAV+AYPN F+RIIGFDNVRQVQCISFIAHRP GY
Sbjct: 147 DEAVRAYPNAFVRIIGFDNVRQVQCISFIAHRPAGY 182


>gb|AFK48034.1| unknown [Lotus japonicus]
          Length = 181

 Score =  194 bits (493), Expect = 6e-48
 Identities = 85/96 (88%), Positives = 92/96 (95%)
 Frame = +3

Query: 6   REVDYLLRKGWVPCLEFELEKGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSAQVLKEL 185
           +EV+YLLRKGWVPCLEFE EKGFVYRENH+SPGYYDGRYWTMWKLPMFGC+D+ QVLKEL
Sbjct: 86  KEVEYLLRKGWVPCLEFETEKGFVYRENHKSPGYYDGRYWTMWKLPMFGCSDATQVLKEL 145

Query: 186 EEAVKAYPNGFIRIIGFDNVRQVQCISFIAHRPPGY 293
           +EAVKAYPN F+RIIGFDNVRQVQCISFIAHRP GY
Sbjct: 146 DEAVKAYPNAFVRIIGFDNVRQVQCISFIAHRPAGY 181


>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
           carboxylase [Malus sp.]
          Length = 183

 Score =  191 bits (484), Expect = 7e-47
 Identities = 86/97 (88%), Positives = 91/97 (93%)
 Frame = +3

Query: 3   AREVDYLLRKGWVPCLEFELEKGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSAQVLKE 182
           A+EVDYLLRK WVPCLEFELE GFVYRENHRSPGYYDGRYWTMWKLPMFGCTDS+QVLKE
Sbjct: 87  AKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKE 146

Query: 183 LEEAVKAYPNGFIRIIGFDNVRQVQCISFIAHRPPGY 293
           LEEA KAYP  FIRIIGFDNVRQVQCISFIA++P G+
Sbjct: 147 LEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183


>sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|218021|dbj|BAA00450.1| RuBisCO small
           subunit [Pyrus pyrifolia var. culta]
          Length = 183

 Score =  191 bits (484), Expect = 7e-47
 Identities = 86/97 (88%), Positives = 91/97 (93%)
 Frame = +3

Query: 3   AREVDYLLRKGWVPCLEFELEKGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSAQVLKE 182
           A+EVDYLLRK WVPCLEFELE GFVYRENHRSPGYYDGRYWTMWKLPMFGCTDS+QVLKE
Sbjct: 87  AKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKE 146

Query: 183 LEEAVKAYPNGFIRIIGFDNVRQVQCISFIAHRPPGY 293
           LEEA KAYP  FIRIIGFDNVRQVQCISFIA++P G+
Sbjct: 147 LEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183


>sp|Q42822.1|RBS_GLYTO RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|1079738|gb|AAA82070.1| ribulose
           1,5-bisphosphate carboxylase/oxygenase small subunit
           precursor [Glycine tomentella]
          Length = 178

 Score =  190 bits (483), Expect = 9e-47
 Identities = 83/97 (85%), Positives = 93/97 (95%)
 Frame = +3

Query: 3   AREVDYLLRKGWVPCLEFELEKGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSAQVLKE 182
           A+EV+YLLRKGW+PCLEFELE GFVYRENHRSPGYYDGRYWTMWKLP+FGCTD++QVLKE
Sbjct: 82  AKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKE 141

Query: 183 LEEAVKAYPNGFIRIIGFDNVRQVQCISFIAHRPPGY 293
           L+EA  AYPNGFIRIIGFDNVRQVQCISFIA++PP +
Sbjct: 142 LQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPSF 178


Top