BLASTX nr result

ID: Atractylodes21_contig00029317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029317
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33917.1| unnamed protein product [Thellungiella halophila]      75   5e-12
gb|AAF79551.1|AC022464_9 F22G5.14 [Arabidopsis thaliana]               73   2e-11
gb|AAF79573.1|AC022464_31 F22G5.18 [Arabidopsis thaliana]              73   2e-11
ref|XP_002892402.1| transcription factor IIA large subunit [Arab...    73   2e-11
ref|XP_002889649.1| hypothetical protein ARALYDRAFT_470771 [Arab...    73   2e-11

>dbj|BAJ33917.1| unnamed protein product [Thellungiella halophila]
          Length = 375

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = +3

Query: 159 TSTTSSVYVQVIEDVISKIREEFINNAGPGEGVLNELQGLWE 284
           T+TTS+VY+ VIEDV++K+REEFINN GPGE VLNELQG+WE
Sbjct: 4   TTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLNELQGIWE 45


>gb|AAF79551.1|AC022464_9 F22G5.14 [Arabidopsis thaliana]
          Length = 488

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/42 (73%), Positives = 39/42 (92%)
 Frame = +3

Query: 159 TSTTSSVYVQVIEDVISKIREEFINNAGPGEGVLNELQGLWE 284
           T+TTS+VY+ VIEDV++K+REEFINN GPGE VL+ELQG+WE
Sbjct: 4   TTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWE 45


>gb|AAF79573.1|AC022464_31 F22G5.18 [Arabidopsis thaliana]
          Length = 475

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/42 (73%), Positives = 39/42 (92%)
 Frame = +3

Query: 159 TSTTSSVYVQVIEDVISKIREEFINNAGPGEGVLNELQGLWE 284
           T+TTS+VY+ VIEDV++K+REEFINN GPGE VL+ELQG+WE
Sbjct: 4   TTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWE 45


>ref|XP_002892402.1| transcription factor IIA large subunit [Arabidopsis lyrata subsp.
           lyrata] gi|297338244|gb|EFH68661.1| transcription factor
           IIA large subunit [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/42 (73%), Positives = 39/42 (92%)
 Frame = +3

Query: 159 TSTTSSVYVQVIEDVISKIREEFINNAGPGEGVLNELQGLWE 284
           T+TTS+VY+ VIEDV++K+REEFINN GPGE VL+ELQG+WE
Sbjct: 4   TTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWE 45


>ref|XP_002889649.1| hypothetical protein ARALYDRAFT_470771 [Arabidopsis lyrata subsp.
           lyrata] gi|297335491|gb|EFH65908.1| hypothetical protein
           ARALYDRAFT_470771 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/42 (73%), Positives = 39/42 (92%)
 Frame = +3

Query: 159 TSTTSSVYVQVIEDVISKIREEFINNAGPGEGVLNELQGLWE 284
           T+TTS+VY+ VIEDV++K+REEFINN GPGE VL+ELQG+WE
Sbjct: 4   TTTTSAVYIHVIEDVVNKVREEFINNGGPGESVLSELQGIWE 45


Top