BLASTX nr result

ID: Atractylodes21_contig00029250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029250
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23729.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266...   107   8e-22
ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago t...   104   8e-21
gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum]     104   8e-21
ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch...   103   1e-20

>emb|CBI23729.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/72 (75%), Positives = 61/72 (84%)
 Frame = -3

Query: 280  RVCAHRSKQGMQNASFLYFLVPGKSMACQLETLLINRLPKHGFQLTNVADGKHRNFGTCD 101
            RV AHRSK+GMQ ASFLYF+VPGKS+ACQLETLLIN+LP  GFQL N ADGKHRNFGT D
Sbjct: 1045 RVRAHRSKEGMQKASFLYFVVPGKSLACQLETLLINQLPVQGFQLVNRADGKHRNFGTLD 1104

Query: 100  VSLEVEGTSLHR 65
             S+EV   +LH+
Sbjct: 1105 HSVEV--VTLHQ 1114


>ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266612 [Vitis vinifera]
          Length = 1144

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/72 (75%), Positives = 61/72 (84%)
 Frame = -3

Query: 280  RVCAHRSKQGMQNASFLYFLVPGKSMACQLETLLINRLPKHGFQLTNVADGKHRNFGTCD 101
            RV AHRSK+GMQ ASFLYF+VPGKS+ACQLETLLIN+LP  GFQL N ADGKHRNFGT D
Sbjct: 1075 RVRAHRSKEGMQKASFLYFVVPGKSLACQLETLLINQLPVQGFQLVNRADGKHRNFGTLD 1134

Query: 100  VSLEVEGTSLHR 65
             S+EV   +LH+
Sbjct: 1135 HSVEV--VTLHQ 1144


>ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago truncatula]
            gi|355479231|gb|AES60434.1| DNA mismatch repair protein
            mutS [Medicago truncatula]
          Length = 1230

 Score =  104 bits (259), Expect = 8e-21
 Identities = 48/61 (78%), Positives = 56/61 (91%)
 Frame = -3

Query: 280  RVCAHRSKQGMQNASFLYFLVPGKSMACQLETLLINRLPKHGFQLTNVADGKHRNFGTCD 101
            RV AHRSK+GMQ+ASFLYFLVPGKS+ACQ+ETLLIN+LP  GF L+N+ADGKHRNFGT +
Sbjct: 1168 RVRAHRSKEGMQDASFLYFLVPGKSLACQIETLLINQLPNRGFLLSNIADGKHRNFGTSN 1227

Query: 100  V 98
            V
Sbjct: 1228 V 1228


>gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum]
          Length = 1124

 Score =  104 bits (259), Expect = 8e-21
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = -3

Query: 280  RVCAHRSKQGMQNASFLYFLVPGKSMACQLETLLINRLPKHGFQLTNVADGKHRNFG 110
            RV AHR K+GM+NASFLYFLV GKS+ACQLETLLIN+LP HGFQLTNVADGKHRNFG
Sbjct: 1068 RVRAHRLKEGMENASFLYFLVSGKSIACQLETLLINQLPNHGFQLTNVADGKHRNFG 1124


>ref|XP_004170676.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH1,
           mitochondrial-like, partial [Cucumis sativus]
          Length = 675

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/61 (77%), Positives = 56/61 (91%)
 Frame = -3

Query: 280 RVCAHRSKQGMQNASFLYFLVPGKSMACQLETLLINRLPKHGFQLTNVADGKHRNFGTCD 101
           RV +HR K+GM++A+FLY +VPGKS+ACQLETLLINRLP HGFQLTNVADGKHRNFGT +
Sbjct: 606 RVQSHRLKEGMRDAAFLYLMVPGKSLACQLETLLINRLPDHGFQLTNVADGKHRNFGTAN 665

Query: 100 V 98
           +
Sbjct: 666 L 666


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