BLASTX nr result

ID: Atractylodes21_contig00029209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029209
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]   165   4e-39
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   159   3e-37
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   155   2e-36
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   155   3e-36
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   153   2e-35

>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
          Length = 1323

 Score =  165 bits (417), Expect = 4e-39
 Identities = 74/131 (56%), Positives = 96/131 (73%)
 Frame = +2

Query: 2   EQGIILETTCPHTPQQNGVVEHKHRHLLETARALKFEANLPIRFWGECILTATYIINRLP 181
           + G+I + +C +TPQQNGVVE KHRH+L+ ARALKF A +P +FWGEC LTA +IINRLP
Sbjct: 506 DNGVIFQHSCVYTPQQNGVVERKHRHILQVARALKFHAQVPTQFWGECALTAVHIINRLP 565

Query: 182 SKVREDKTPYELLYGEKPSYDHMRVLGCMAYYRSIETKGDKFEIRGRPGIFIGYPSGTKG 361
           S +   KTP+ELLY + PSY H+RV GC+AY  ++ T   KF+ R  P IFIGYP G K 
Sbjct: 566 SPILSFKTPFELLYSKPPSYSHLRVFGCLAYATNVHT-SHKFDYRAMPSIFIGYPVGQKA 624

Query: 362 YKIYDPNHDKI 394
           YK++D +  K+
Sbjct: 625 YKLFDLSTKKV 635


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/131 (54%), Positives = 94/131 (71%)
 Frame = +2

Query: 2    EQGIILETTCPHTPQQNGVVEHKHRHLLETARALKFEANLPIRFWGECILTATYIINRLP 181
            + G+I + +C +TPQQNGVVE KHRH+L+ ARALKF A +P +FWGEC LTA +IINRL 
Sbjct: 656  DNGVIFQHSCVYTPQQNGVVERKHRHILQVARALKFHAQVPTQFWGECALTAVHIINRLX 715

Query: 182  SKVREDKTPYELLYGEKPSYDHMRVLGCMAYYRSIETKGDKFEIRGRPGIFIGYPSGTKG 361
            S +   KTP+ELLY + P Y H+RV GC+AY  ++ T   KF+ R  P IFIGYP G K 
Sbjct: 716  SPILSFKTPFELLYLKSPXYSHLRVFGCLAYATNVHT-SHKFDYRAMPSIFIGYPVGQKA 774

Query: 362  YKIYDPNHDKI 394
            YK++D +  K+
Sbjct: 775  YKLFDLSTKKV 785


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/125 (55%), Positives = 91/125 (72%)
 Frame = +2

Query: 2   EQGIILETTCPHTPQQNGVVEHKHRHLLETARALKFEANLPIRFWGECILTATYIINRLP 181
           EQG+I E +C  TP++N  VE KHRHLL  ARAL+F+ANLPI+FWGEC+LTA Y+INR P
Sbjct: 530 EQGVIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTAAYLINRTP 589

Query: 182 SKVREDKTPYELLYGEKPSYDHMRVLGCMAYYRSIETKGDKFEIRGRPGIFIGYPSGTKG 361
           S V  D TPYE L+ ++P +DH+RV G + Y  +    GDKF  R R  +F+GYP G KG
Sbjct: 590 SSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFVGYPHGQKG 649

Query: 362 YKIYD 376
           ++++D
Sbjct: 650 WRLFD 654


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/129 (55%), Positives = 90/129 (69%)
 Frame = +2

Query: 8    GIILETTCPHTPQQNGVVEHKHRHLLETARALKFEANLPIRFWGECILTATYIINRLPSK 187
            GI+ +T+C  TPQQNG VE KHRH+L  ARA  F+ NLP++FWGE ILTAT++INR PS 
Sbjct: 642  GILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSA 701

Query: 188  VREDKTPYELLYGEKPSYDHMRVLGCMAYYRSIETKGDKFEIRGRPGIFIGYPSGTKGYK 367
            V + KTPYELL+GE+PSYD +R  GC+ Y        DKF  R R  +FIGYP G K ++
Sbjct: 702  VLKGKTPYELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWR 761

Query: 368  IYDPNHDKI 394
            +YD    KI
Sbjct: 762  VYDLETGKI 770


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  153 bits (386), Expect = 2e-35
 Identities = 71/125 (56%), Positives = 87/125 (69%)
 Frame = +2

Query: 2    EQGIILETTCPHTPQQNGVVEHKHRHLLETARALKFEANLPIRFWGECILTATYIINRLP 181
            E GII +T+C  TPQQNG VE KHRH+L  ARAL F+A+LPI+FWGE ILTA Y+INR P
Sbjct: 667  ENGIIHQTSCVGTPQQNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTP 726

Query: 182  SKVREDKTPYELLYGEKPSYDHMRVLGCMAYYRSIETKGDKFEIRGRPGIFIGYPSGTKG 361
            S +   +TPYE+L+G KP Y  +RV G   Y   +    DKF  R R  IF+GYP G KG
Sbjct: 727  SSILSGRTPYEVLHGSKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKG 786

Query: 362  YKIYD 376
            +K+YD
Sbjct: 787  WKVYD 791


Top