BLASTX nr result

ID: Atractylodes21_contig00029190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029190
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282694.1| PREDICTED: probable cytosolic iron-sulfur pr...    81   1e-13
ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communi...    79   5e-13
ref|XP_002299788.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002878917.1| EMB1345 [Arabidopsis lyrata subsp. lyrata] g...    76   3e-12
ref|NP_565615.1| transducin/WD-40 repeat-containing protein [Ara...    73   2e-11

>ref|XP_002282694.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein
           [Vitis vinifera] gi|297740110|emb|CBI30292.3| unnamed
           protein product [Vitis vinifera]
          Length = 344

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = +3

Query: 3   SEDHSVDGASYKLLLKKEKAHAMDVNSVQWSSVGNGLLASASDDGTIKIWKLKS 164
           S+D  VDG  YKL+LKKE+AH MD+NSVQWSS  N LLASASDDGTIKIW+L S
Sbjct: 289 SKDGLVDGPLYKLMLKKEQAHDMDINSVQWSSGENRLLASASDDGTIKIWELAS 342


>ref|XP_002528743.1| WD-repeat protein, putative [Ricinus communis]
           gi|223531837|gb|EEF33655.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 349

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = +3

Query: 3   SEDHSVDGASYKLLLKKEKAHAMDVNSVQWSSVGNGLLASASDDGTIKIWKL 158
           S+D  V+G SY+LLLKKEKAH MD+NSVQW+   N LLASASDDGTIKIW+L
Sbjct: 294 SKDDLVNGPSYRLLLKKEKAHDMDINSVQWAPGENRLLASASDDGTIKIWEL 345


>ref|XP_002299788.1| predicted protein [Populus trichocarpa] gi|222847046|gb|EEE84593.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/51 (72%), Positives = 41/51 (80%)
 Frame = +3

Query: 3   SEDHSVDGASYKLLLKKEKAHAMDVNSVQWSSVGNGLLASASDDGTIKIWK 155
           S+D  VDG SYKLLLK+EKAH MD+NSVQW     GLLAS SDDGTIKIW+
Sbjct: 273 SKDGLVDGPSYKLLLKREKAHEMDINSVQWGPGETGLLASTSDDGTIKIWE 323


>ref|XP_002878917.1| EMB1345 [Arabidopsis lyrata subsp. lyrata]
           gi|297324756|gb|EFH55176.1| EMB1345 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 352

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/53 (73%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +3

Query: 3   SEDHSVDGASYKLLLKKEKAHAMDVNSVQWS-SVGNGLLASASDDGTIKIWKL 158
           S+D SVDG SY LLLKK KAH  DVNSVQWS   GN LLASASDDG +KIW+L
Sbjct: 296 SKDDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQL 348


>ref|NP_565615.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|20197268|gb|AAC31230.2| expressed protein
           [Arabidopsis thaliana] gi|20260510|gb|AAM13153.1|
           unknown protein [Arabidopsis thaliana]
           gi|21553416|gb|AAM62509.1| unknown [Arabidopsis
           thaliana] gi|28059424|gb|AAO30057.1| unknown protein
           [Arabidopsis thaliana] gi|330252696|gb|AEC07790.1|
           transducin/WD-40 repeat-containing protein [Arabidopsis
           thaliana]
          Length = 352

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 38/53 (71%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = +3

Query: 3   SEDHSVDGASYKLLLKKEKAHAMDVNSVQWS-SVGNGLLASASDDGTIKIWKL 158
           S+  SVDG SY LLLKK KAH  DVNSVQWS   GN LLASASDDG +KIW+L
Sbjct: 296 SKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIWQL 348


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