BLASTX nr result

ID: Atractylodes21_contig00029133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029133
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32913.3| unnamed protein product [Vitis vinifera]               59   3e-07
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    59   3e-07
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    57   2e-06
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...    57   2e-06
ref|XP_003613721.1| F-box/LRR-repeat protein [Medicago truncatul...    57   2e-06

>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
 Frame = +1

Query: 1   VELPSHISFPCL*TLHLSLVTFPNDNATEKLFSGCPVLEELVL----LDCEWMXXXXXXX 168
           +++P+ +  P L  LHL  V + +D++ +KL SGCPVLEELV+     D +W+       
Sbjct: 131 LDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPS 190

Query: 169 XXXXXXXXXXXXXPYFGPLDDPSGCMIKIDATNLTYMEYIGYLSNEISLNNVSSLIKACI 348
                         +    +D     + +DA NL Y+    YLS +  + ++ SL+KA I
Sbjct: 191 LKILRIFFFTDGFAHPYEQED-QDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFI 249

Query: 349 HIPIPHERQKE 381
            +    E  +E
Sbjct: 250 DVEQDSEEFEE 260


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 4/131 (3%)
 Frame = +1

Query: 1   VELPSHISFPCL*TLHLSLVTFPNDNATEKLFSGCPVLEELVL----LDCEWMXXXXXXX 168
           +++P+ +  P L  LHL  V + +D++ +KL SGCPVLEELV+     D +W+       
Sbjct: 154 LDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPS 213

Query: 169 XXXXXXXXXXXXXPYFGPLDDPSGCMIKIDATNLTYMEYIGYLSNEISLNNVSSLIKACI 348
                         +    +D     + +DA NL Y+    YLS +  + ++ SL+KA I
Sbjct: 214 LKILRIFFFTDGFAHPYEQED-QDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFI 272

Query: 349 HIPIPHERQKE 381
            +    E  +E
Sbjct: 273 DVEQDSEEFEE 283


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/116 (31%), Positives = 52/116 (44%)
 Frame = +1

Query: 7   LPSHISFPCL*TLHLSLVTFPNDNATEKLFSGCPVLEELVLLDCEWMXXXXXXXXXXXXX 186
           +P  I FP L  L  + VTF N+ + ++LFSGCPVL++L    C W+             
Sbjct: 164 VPDGICFPSLKILSFAHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNINISVAIPTLKK 223

Query: 187 XXXXXXXPYFGPLDDPSGCMIKIDATNLTYMEYIGYLSNEISLNNVSSLIKACIHI 354
                         D + CM KIDA NL  + Y    +    L N +S++ A I +
Sbjct: 224 LDIFFRSSSL----DRNSCMFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDL 275


>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
           F-box family-3 [Medicago truncatula]
          Length = 642

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 36/48 (75%)
 Frame = +1

Query: 1   VELPSHISFPCL*TLHLSLVTFPNDNATEKLFSGCPVLEELVLLDCEW 144
           + +PS I FP L TL ++ VTF N+N+ ++LFSGCPVL+EL L +C W
Sbjct: 327 LHIPSGICFPILKTLVVTNVTFANENSAQQLFSGCPVLQELELDNCYW 374


>ref|XP_003613721.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355515056|gb|AES96679.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 703

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = +1

Query: 7   LPSHISFPCL*TLHLSLVTFPNDNATEKLFSGCPVLEELVLLDCEWMXXXXXXXXXXXXX 186
           +P  I FP L TL+LS ++F N+ + ++L SGCPVL+EL L    W+             
Sbjct: 174 IPDGIRFPNLKTLYLSHLSFANEKSAQRLLSGCPVLQELTLYKFFWLNIEQINVAISTLR 233

Query: 187 XXXXXXXPYFGPLD-DPSGCMIKIDATNLTYMEYIGYLSNEISLNNVSSLIKACIHI 354
                   +F P D       IK D  NL  + Y  +   +  L N +S++ ACI +
Sbjct: 234 KLTIELN-HFDPSDLRIRSFTIKFDVANLLSLSYTAHPIIKFVLVNPTSIVDACIDL 289


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