BLASTX nr result

ID: Atractylodes21_contig00029089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029089
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    71   1e-10
ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    69   3e-10
ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    64   1e-08

>ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|222859846|gb|EEE97393.1|
            predicted protein [Populus trichocarpa]
          Length = 3663

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
 Frame = +2

Query: 20   TDVTQQLPQPTYQDDHS-NLNQPAVQEMRVDME-TETIHPSVELGMGFMHEELEDSGELQ 193
            TD+ QQ      + +H+ + NQPA Q+MR++ E T   +PSVE+GM FMHEE+E+ G L 
Sbjct: 2036 TDIQQQQGTTHVEGNHAAHQNQPAEQDMRIESEDTMPTNPSVEIGMDFMHEEMEEGGVLH 2095

Query: 194  IPDQIEMTFHAENRVGNNTGDED 262
              DQIEMTF  ENR G++ GDED
Sbjct: 2096 NTDQIEMTFRVENRAGDDMGDED 2118


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
 Frame = +2

Query: 17   GTDVTQQLPQPTYQDDHS-NLNQPAVQEMRVDME-TETIHPSVELGMGFMHEELEDSGEL 190
            GTD+ QQ        +H+ + N+ A Q+MR++ E T   +PS+E+G+ FM EE+E+ G L
Sbjct: 2069 GTDIQQQEGTTHVDGNHAVHQNESAEQDMRLESEDTMATNPSMEVGLDFMREEMEEGGVL 2128

Query: 191  QIPDQIEMTFHAENRVGNNTGDED 262
                QIEMTFH ENR  ++ GDED
Sbjct: 2129 HNTGQIEMTFHVENRADDDMGDED 2152


>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
 Frame = +2

Query: 8    EVTGTDVTQQLPQPTYQDD---HSNLNQPAVQEMRVDMETE-TIHPSVELGMGFMHEELE 175
            +  GT+  Q+ PQ   Q +    +N +Q   QEMR+++E   T +P +ELGM FM EE++
Sbjct: 2444 DAAGTE--QRQPQGISQSEGNHDANQDQSVEQEMRIEVEEAMTANPPMELGMDFMREEMD 2501

Query: 176  DSGELQIPDQIEMTFHAENRVGNNTGDED 262
            + G L   DQIEMT+H ENR  ++ GDED
Sbjct: 2502 EGGVLHNTDQIEMTYHVENRADDDMGDED 2530


>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
 Frame = +2

Query: 38   LPQPTYQDDH--SNLNQPAVQEMRVDME-TETIHPSVELGMGFMHEELEDSGELQIPDQI 208
            L Q T Q D    N NQ   Q+MRV+       +PS+ELGM FM EE+ + G L  PDQI
Sbjct: 2067 LDQGTSQGDDRADNPNQSMEQDMRVEERGVMAQNPSMELGMDFMREEMGEGGVLHNPDQI 2126

Query: 209  EMTFHAENRVGNNTGDED 262
            EMTFH ENR  ++ GDED
Sbjct: 2127 EMTFHVENRAHDDMGDED 2144


>ref|XP_004166446.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL1-like
            [Cucumis sativus]
          Length = 3692

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = +2

Query: 23   DVTQQLPQPTYQDDHSNL--NQPAVQEMRVDME-TETIHPSVELGMGFMHEELEDSGELQ 193
            D  QQ    T  D + N   N+   QEMR+++E T   +  +ELGM FM EE+E++G L 
Sbjct: 2011 DNNQQEFAATQNDGNINTQTNRSLEQEMRLEVEGTMAANEHMELGMEFMREEMEEAGVLH 2070

Query: 194  IPDQIEMTFHAENRVGNNTGDED 262
              DQIEM FH ENR     GDED
Sbjct: 2071 NSDQIEMNFHVENRADEEMGDED 2093


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