BLASTX nr result

ID: Atractylodes21_contig00029083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029083
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   177   1e-42
ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatu...   172   3e-41
ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like ...   171   7e-41
ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyas...   168   4e-40
emb|CBI19298.3| unnamed protein product [Vitis vinifera]              168   4e-40

>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  177 bits (448), Expect = 1e-42
 Identities = 83/130 (63%), Positives = 101/130 (77%)
 Frame = +2

Query: 5   HVVIDNGILQVTLSNPEGIVTGIRYNGLDNLLEVLNNESDRGYWDVVWSALDGSGRTGVF 184
           HV++DNGILQVTLSNPEGIVTGI+YNG+ NLLEVLN+ES+RGYWD+VWS    +G TG+F
Sbjct: 14  HVMLDNGILQVTLSNPEGIVTGIQYNGIGNLLEVLNDESNRGYWDLVWSTPGSTGTTGIF 73

Query: 185 EVIKATIFKXXXXXXXXXXXXXXRPWDPSLKGKFVPLNIDKRFVLLRGCSGFYTYAIYEH 364
           +VIK T FK              R WDPSL+GK +PLNIDKRFV+LRG SGFY+YAI+EH
Sbjct: 74  DVIKGTSFKVIVETEEQVELSFTRSWDPSLEGKLIPLNIDKRFVMLRGSSGFYSYAIFEH 133

Query: 365 MGSQEWQAFS 394
           +  +EW  F+
Sbjct: 134 L--KEWPGFN 141


>ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355492757|gb|AES73960.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 651

 Score =  172 bits (435), Expect = 3e-41
 Identities = 84/133 (63%), Positives = 102/133 (76%), Gaps = 3/133 (2%)
 Frame = +2

Query: 5   HVVIDNGILQVTLSNPEGIVTGIRYNGLDNLLEVLNNESDRGY---WDVVWSALDGSGRT 175
           HVV+DNGIL+VTLSNPEGIVTGI+Y+ +DNLLEVLN ES+RGY   WD+VWS+   +G T
Sbjct: 14  HVVMDNGILRVTLSNPEGIVTGIQYSDIDNLLEVLNEESNRGYTLYWDLVWSSPTSTGTT 73

Query: 176 GVFEVIKATIFKXXXXXXXXXXXXXXRPWDPSLKGKFVPLNIDKRFVLLRGCSGFYTYAI 355
           G F+VIKAT FK              R WD SL+GK VPLNIDKRF++LRGCSGFY+YAI
Sbjct: 74  GKFDVIKATTFKVILEDEDQVELSFTRTWDASLEGKLVPLNIDKRFIMLRGCSGFYSYAI 133

Query: 356 YEHMGSQEWQAFS 394
           YEH+  ++W AF+
Sbjct: 134 YEHL--EDWPAFN 144


>ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/130 (62%), Positives = 101/130 (77%)
 Frame = +2

Query: 5   HVVIDNGILQVTLSNPEGIVTGIRYNGLDNLLEVLNNESDRGYWDVVWSALDGSGRTGVF 184
           HVV++NG+L+VTLSNPEGIVTGI+YN +DNLLEVLN+ES+RGYWD+VWS+   +G +G F
Sbjct: 14  HVVMENGMLKVTLSNPEGIVTGIQYNDIDNLLEVLNDESNRGYWDLVWSSPTSTGTSGTF 73

Query: 185 EVIKATIFKXXXXXXXXXXXXXXRPWDPSLKGKFVPLNIDKRFVLLRGCSGFYTYAIYEH 364
           +VIK T FK              R WD SL+GK VPLNIDKRFV+LRG SGFY+YAIYEH
Sbjct: 74  DVIKGTTFKVMVENEDQVELSFTRTWDVSLEGKLVPLNIDKRFVMLRGSSGFYSYAIYEH 133

Query: 365 MGSQEWQAFS 394
           +  ++W AF+
Sbjct: 134 L--EDWPAFN 141


>ref|XP_002285626.2| PREDICTED: probable rhamnogalacturonate lyase B-like isoform 1
           [Vitis vinifera]
          Length = 643

 Score =  168 bits (426), Expect = 4e-40
 Identities = 82/130 (63%), Positives = 99/130 (76%)
 Frame = +2

Query: 5   HVVIDNGILQVTLSNPEGIVTGIRYNGLDNLLEVLNNESDRGYWDVVWSALDGSGRTGVF 184
           HVV+DNGILQVTLSNP GIVTGIRY+ +DNLLEVLN+E++RGYWD+VWS     G  G+F
Sbjct: 14  HVVMDNGILQVTLSNPGGIVTGIRYSAIDNLLEVLNDETNRGYWDLVWSV---PGSAGIF 70

Query: 185 EVIKATIFKXXXXXXXXXXXXXXRPWDPSLKGKFVPLNIDKRFVLLRGCSGFYTYAIYEH 364
           +VIK T F+              R WDPSL+GK VPLNIDKRF++LRG SGFY+YAIYEH
Sbjct: 71  DVIKGTNFRVIVENEEQVEISFTRMWDPSLEGKLVPLNIDKRFIMLRGSSGFYSYAIYEH 130

Query: 365 MGSQEWQAFS 394
           +  +EW AF+
Sbjct: 131 L--KEWPAFT 138


>emb|CBI19298.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  168 bits (426), Expect = 4e-40
 Identities = 82/130 (63%), Positives = 99/130 (76%)
 Frame = +2

Query: 5   HVVIDNGILQVTLSNPEGIVTGIRYNGLDNLLEVLNNESDRGYWDVVWSALDGSGRTGVF 184
           HVV+DNGILQVTLSNP GIVTGIRY+ +DNLLEVLN+E++RGYWD+VWS     G  G+F
Sbjct: 14  HVVMDNGILQVTLSNPGGIVTGIRYSAIDNLLEVLNDETNRGYWDLVWSV---PGSAGIF 70

Query: 185 EVIKATIFKXXXXXXXXXXXXXXRPWDPSLKGKFVPLNIDKRFVLLRGCSGFYTYAIYEH 364
           +VIK T F+              R WDPSL+GK VPLNIDKRF++LRG SGFY+YAIYEH
Sbjct: 71  DVIKGTNFRVIVENEEQVEISFTRMWDPSLEGKLVPLNIDKRFIMLRGSSGFYSYAIYEH 130

Query: 365 MGSQEWQAFS 394
           +  +EW AF+
Sbjct: 131 L--KEWPAFT 138


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