BLASTX nr result

ID: Atractylodes21_contig00029075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029075
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|2...   300   1e-79
ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [...   296   2e-78
ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-...   296   3e-78
ref|XP_004151563.1| PREDICTED: DNA polymerase epsilon subunit 2-...   296   3e-78
gb|EEC78576.1| hypothetical protein OsI_18564 [Oryza sativa Indi...   293   2e-77

>ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|222858998|gb|EEE96545.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  300 bits (769), Expect = 1e-79
 Identities = 139/152 (91%), Positives = 144/152 (94%)
 Frame = -3

Query: 633 TVLPRSALPKYITEELQKHIPNAIFASNPCRIKFYTQEIVFFRQDLLYRMRRSCLIPPST 454
           TVLPR  LPKY+TEELQKHIPNAIFASNPCR+KFYTQEIVFFR DLLYRMRRSCL+PPST
Sbjct: 367 TVLPRCPLPKYLTEELQKHIPNAIFASNPCRVKFYTQEIVFFRHDLLYRMRRSCLMPPST 426

Query: 453 EETSDPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLYPTPHTIVLGDNSEQKAFKY 274
           EET DPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLYP+PHTIVLGD SEQKAFKY
Sbjct: 427 EETDDPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLYPSPHTIVLGDRSEQKAFKY 486

Query: 273 TDITCFNPGSFSNDSTFVVYRPCNREVELSAL 178
           T ITCFNPGSFSNDSTFV YRPC +EVELSAL
Sbjct: 487 TGITCFNPGSFSNDSTFVAYRPCTQEVELSAL 518


>ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [Ricinus communis]
           gi|223529398|gb|EEF31361.1| DNA polymerase epsilon
           subunit B, putative [Ricinus communis]
          Length = 536

 Score =  296 bits (758), Expect = 2e-78
 Identities = 135/152 (88%), Positives = 145/152 (95%)
 Frame = -3

Query: 633 TVLPRSALPKYITEELQKHIPNAIFASNPCRIKFYTQEIVFFRQDLLYRMRRSCLIPPST 454
           TVLPR ALPKY+TE+LQKHIPNAIF++NPCR+KFYTQEIVFFR DLLYRM RSCL+PPST
Sbjct: 385 TVLPRCALPKYLTEDLQKHIPNAIFSTNPCRVKFYTQEIVFFRHDLLYRMHRSCLMPPST 444

Query: 453 EETSDPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLYPTPHTIVLGDNSEQKAFKY 274
           EET+DPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLYP+PHTIVLGD SEQKAFKY
Sbjct: 445 EETADPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLYPSPHTIVLGDKSEQKAFKY 504

Query: 273 TDITCFNPGSFSNDSTFVVYRPCNREVELSAL 178
           T ITCFNPGSFSNDSTFV YRPC +EVELS+L
Sbjct: 505 TGITCFNPGSFSNDSTFVAYRPCTQEVELSSL 536


>ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Cucumis sativus]
          Length = 536

 Score =  296 bits (757), Expect = 3e-78
 Identities = 134/152 (88%), Positives = 145/152 (95%)
 Frame = -3

Query: 633 TVLPRSALPKYITEELQKHIPNAIFASNPCRIKFYTQEIVFFRQDLLYRMRRSCLIPPST 454
           TVLPR ALPKY+TEELQ H+ NAIF+SNPCR++FYTQEIVFFRQDLLYRMRRSCLIPPST
Sbjct: 385 TVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPST 444

Query: 453 EETSDPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLYPTPHTIVLGDNSEQKAFKY 274
           EETSDPFEHLVATITHQSHLCPLPL++QPIIWNYDHCLHLYPTPH IVLGD S+Q+AFKY
Sbjct: 445 EETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKY 504

Query: 273 TDITCFNPGSFSNDSTFVVYRPCNREVELSAL 178
           T ITCFNPGSF+NDSTFV YRPCN+EVELSAL
Sbjct: 505 TGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 536


>ref|XP_004151563.1| PREDICTED: DNA polymerase epsilon subunit 2-like, partial [Cucumis
           sativus]
          Length = 292

 Score =  296 bits (757), Expect = 3e-78
 Identities = 134/152 (88%), Positives = 145/152 (95%)
 Frame = -3

Query: 633 TVLPRSALPKYITEELQKHIPNAIFASNPCRIKFYTQEIVFFRQDLLYRMRRSCLIPPST 454
           TVLPR ALPKY+TEELQ H+ NAIF+SNPCR++FYTQEIVFFRQDLLYRMRRSCLIPPST
Sbjct: 141 TVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPST 200

Query: 453 EETSDPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLYPTPHTIVLGDNSEQKAFKY 274
           EETSDPFEHLVATITHQSHLCPLPL++QPIIWNYDHCLHLYPTPH IVLGD S+Q+AFKY
Sbjct: 201 EETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKY 260

Query: 273 TDITCFNPGSFSNDSTFVVYRPCNREVELSAL 178
           T ITCFNPGSF+NDSTFV YRPCN+EVELSAL
Sbjct: 261 TGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 292


>gb|EEC78576.1| hypothetical protein OsI_18564 [Oryza sativa Indica Group]
           gi|222630291|gb|EEE62423.1| hypothetical protein
           OsJ_17214 [Oryza sativa Japonica Group]
          Length = 533

 Score =  293 bits (750), Expect = 2e-77
 Identities = 134/152 (88%), Positives = 143/152 (94%)
 Frame = -3

Query: 627 LPRSALPKYITEELQKHIPNAIFASNPCRIKFYTQEIVFFRQDLLYRMRRSCLIPPSTEE 448
           LPR ALPKY+TEELQKHIPNAIF SNPCR+KFYTQEIVFFRQDLLYRMRRSCLIPP+TEE
Sbjct: 382 LPRCALPKYLTEELQKHIPNAIFVSNPCRVKFYTQEIVFFRQDLLYRMRRSCLIPPTTEE 441

Query: 447 TSDPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLYPTPHTIVLGDNSEQKAFKYTD 268
           TSDPFEHLVATITHQSHLCPLPL VQPIIW+YDHCL LYPTPHTIVLGD S+QKAFKYT 
Sbjct: 442 TSDPFEHLVATITHQSHLCPLPLTVQPIIWSYDHCLRLYPTPHTIVLGDKSDQKAFKYTG 501

Query: 267 ITCFNPGSFSNDSTFVVYRPCNREVELSALDA 172
           ITCFNPGSF+NDSTF  YRPC +EVELSAL++
Sbjct: 502 ITCFNPGSFANDSTFAAYRPCTKEVELSALES 533


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