BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029013
         (3816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vit...  1231   0.0  
emb|CBI34953.3| unnamed protein product [Vitis vinifera]             1216   0.0  
dbj|BAK08020.1| predicted protein [Hordeum vulgare subsp. vulgare]   1004   0.0  
ref|XP_002468313.1| hypothetical protein SORBIDRAFT_01g043560 [S...   990   0.0  
ref|NP_566830.1| DNA repair protein UVH3 [Arabidopsis thaliana] ...   988   0.0  

>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
          Length = 1513

 Score = 1231 bits (3185), Expect = 0.0
 Identities = 711/1276 (55%), Positives = 854/1276 (66%), Gaps = 31/1276 (2%)
 Frame = -2

Query: 3761 MGVHGLWDLLSPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDERGEMVRNAHILGFFR 3582
            MGVHGLW+LL+PVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDE+GEMVRN H+LGFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDEKGEMVRNGHLLGFFR 60

Query: 3581 RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQTKIRKTAEKLLLNHLKAMRLK 3402
            RICKLLFLRTKPVFVFDGGTPALKRRTV+ARRRQRENAQ KIRKTAEKLLLNHLKAMRLK
Sbjct: 61   RICKLLFLRTKPVFVFDGGTPALKRRTVVARRRQRENAQAKIRKTAEKLLLNHLKAMRLK 120

Query: 3401 ELANDLENQRKSNGDKGKRVITGKADLAGTTSNTNSPDTKGFDQEALDAMLAASIEAEEG 3222
            ELA DLENQR +N DKGK+V++ + + AG  S  NS  +  ++QE LD MLAAS+ AEE 
Sbjct: 121  ELAKDLENQRLNNNDKGKKVLSYQTETAGEVSEGNSSVSGTYNQEKLDEMLAASLAAEED 180

Query: 3221 RGFIGDASTSGAGVLAXXXXXXXXXXEMLLPTLQGKVDPAVLASLPPSMQLDLLVQMRER 3042
              F+GD     AG+            EM+LP + GKVDPAVLA+LPPSMQLDLLVQMRE+
Sbjct: 181  GNFVGD-----AGISNEEDDDDDEDEEMMLPIMNGKVDPAVLAALPPSMQLDLLVQMREK 235

Query: 3041 LMAENRQKYQKVKKAPARFSELQIEAYLKTVAFRREIDEVQKAAGGRGIGGVKTSRIASE 2862
            LMAENRQKYQKVKKAPA FSELQI+AYLKTVAFRREIDEVQK+A GRG+GGV+TSRIASE
Sbjct: 236  LMAENRQKYQKVKKAPAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTSRIASE 295

Query: 2861 ANREFIFSSSFTGNRQSLASAGGEANGDVQSEIATRLPXXXXXXXXXXXXXSNSAIESIM 2682
            ANRE+IFSSSFTG++++L + G E NGD Q +I T  P             SN+A ES+ 
Sbjct: 296  ANREYIFSSSFTGDKEALTNGGVEKNGDKQYQIPTECP-PDSPNNVASTSKSNTAAESVA 354

Query: 2681 NEPRKAFNEDVETYMDERGRVRVSKVRAMGIRMTRDLQRNLDLMKEIEHDRIDPGRMSND 2502
             EP   FN+DVETY+DERGRVRVS+VRAMGIRMTRDLQRNLDLMKEIE DR +       
Sbjct: 355  GEPASVFNDDVETYLDERGRVRVSRVRAMGIRMTRDLQRNLDLMKEIEQDRTN------- 407

Query: 2501 RIDPGRMSNDRISDRKATVFPSRLPESSKISGTSHQGQSGCSNETNQESIPVSGTSIEVF 2322
                         D    V                       N+TN++SIP +G SIE+ 
Sbjct: 408  ------------EDNNGIV---------------------TLNKTNEQSIPDNGASIEIS 434

Query: 2321 FEDDNKQQSVDSDDDVFARIVAGDPLLTSSADNTSSAKQPSTTLSDCEWEEGIPRDMKG- 2145
            FEDD +   ++ DD++FA +VAG+P++ SS+D   S ++P+ + SD +WEEGI  +  G 
Sbjct: 435  FEDDGEHNCLNGDDELFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEGIIEEKGGS 494

Query: 2144 ---------KRLLSGCRTSDESEVEWEEGPSGNPELGSACEVEYRETVSKGDLLEEADFQ 1992
                     K  +   R SD+SEVEWEEGP    +  SAC  ++    SKG L EE D Q
Sbjct: 495  CIDNVGVEIKPSVMEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQ 554

Query: 1991 EAIRRSMDDMRCQKDIDASSAPEEFKDDKNMATEFAVTVPGYLVKDTNAPR-LPSESLLP 1815
            EAIRRS++D+  +K +  S    + K+      E  V    +  K+  A +  P E+L  
Sbjct: 555  EAIRRSLEDLGGEKAVGESFKDSDIKEYDEKVHE--VKDDAFHKKNDKAEQDFPLENLPE 612

Query: 1814 NKPSAAIVSGVHDGVDNVDETKTKKANSSLTIQLEATTSNDPNLMEV---QMSTFYQSDL 1644
               S   +  V + +D+VD   T ++  +   QL +   ++P+ MEV   ++   YQ D+
Sbjct: 613  QNGSFCKIVDVVEKLDSVDGMNTSQSIDASGRQLTSLLEDNPHKMEVLNNELCEEYQKDV 672

Query: 1643 KYHPELSIRDANDDQNFQGETGHVGVVNQTKENGIELSNEVHEDNCRGNAETL-NCFSST 1467
                              GE+G+VG   +T E  +      H      +  TL N  S  
Sbjct: 673  ------------------GESGNVG--RETNEVYMIREQLSHASKKSVDTSTLANSCSGD 712

Query: 1466 ATYIFNSPDIGMPDVPLADAQPCELKALVNDHISETTELK----ETAVKESESDFDNVHK 1299
             ++I ++    MPD   AD+   + +A    H +ETT+      ET +K   +      K
Sbjct: 713  GSHISDAMLGNMPDATPADSSKYDSEAAPTWHSNETTDPAIPPGETCIKGKTA---VEQK 769

Query: 1298 VTEERDSNAFYEQREDDVNKIVLTDMSEEQVVITKASLEEEMTNLTKERTDLGDEQRRLE 1119
            + E  +   F+ ++E ++   V  D    Q  +T+  LEE M  L +E  +LGDEQR+LE
Sbjct: 770  LAEGNNHVNFFMEKERNMGNSVTEDKKNVQFGVTEDVLEEMMI-LDQECLNLGDEQRKLE 828

Query: 1118 RNAESVSGEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELENLVDGVVTDDSDVLLFGA 939
            RNA+ VS EMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDV LFGA
Sbjct: 829  RNADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 888

Query: 938  RSVYKNIFDDRKYVETYFMKDIEKELGLTREKLIRMAMLLGSDYTEGISGIGIVNAVEVL 759
            RSVYKNIFD+RKYVETYFMKDIE ELGL REK+IRMA+LLGSDYTEG+SGIGIVNA+EVL
Sbjct: 889  RSVYKNIFDERKYVETYFMKDIETELGLNREKVIRMALLLGSDYTEGVSGIGIVNAIEVL 948

Query: 758  NAFPEEDGLQKFREWIESPDPTILGKVDAKEVSSTRKRGSNSSAEEAS-----------T 612
            N+FPEEDGL KFREW+ESPDP ILGKV+ +  SS+RKRGS   + + S            
Sbjct: 949  NSFPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKRGSKVGSGDQSHSKNNMDAFDEN 1008

Query: 611  VNQGVIN-SDDDIHRMKQIFMDKHRNVSKNWHIPSTFPSDAVISAYASPQVDKSTEPFSW 435
            V+Q   N S DDI   KQIFMDKHRNVSKNWHIPS+FPS+ VISAYASPQVD+STEPFSW
Sbjct: 1009 VSQNEHNESVDDIQSGKQIFMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQSTEPFSW 1068

Query: 434  GKPDLFVLRKLCWEKFGWGTQKADELLQPVLKEYNKHETQLRLEAFYTFNERFAKIRSKR 255
            GKPDLFVLRKLC EKFGWG QKADELL PVLKEYNKHETQLRLEAFYTFNERFAKIRSKR
Sbjct: 1069 GKPDLFVLRKLCLEKFGWGNQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKR 1128

Query: 254  ISRAVKGIAGSKTSELMDHNELDATSXXXXXXXXXXXXKTDVAKEQLSTLDESTPTEKSE 75
            I +AVKGI GS+TSEL+D    + +                 +KE  S LD      K E
Sbjct: 1129 IKKAVKGITGSQTSELLDDAVQEGSKRGKR------------SKESPSKLD-----NKQE 1171

Query: 74   LSIQEGGRKNTKEGSS 27
            + I E G    + GS+
Sbjct: 1172 IPINEIGSTAARNGSN 1187


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score = 1216 bits (3146), Expect = 0.0
 Identities = 702/1263 (55%), Positives = 838/1263 (66%), Gaps = 18/1263 (1%)
 Frame = -2

Query: 3761 MGVHGLWDLLSPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDERGEMVRNAHILGFFR 3582
            MGVHGLW+LL+PVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDE+GEMVRN H+LGFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDEKGEMVRNGHLLGFFR 60

Query: 3581 RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQTKIRKTAEKLLLNHLKAMRLK 3402
            RICKLLFLRTKPVFVFDGGTPALKRRTV+ARRRQRENAQ KIRKTAEKLLLNHLKAMRLK
Sbjct: 61   RICKLLFLRTKPVFVFDGGTPALKRRTVVARRRQRENAQAKIRKTAEKLLLNHLKAMRLK 120

Query: 3401 ELANDLENQRKSNGDKGKRVITGKADLAGTTSNTNSPDTKGFDQEALDAMLAASIEAEEG 3222
            ELA DLENQR +N DKGK+V++ + + AG  S  NS  +  ++QE LD MLAAS+ AEE 
Sbjct: 121  ELAKDLENQRLNNNDKGKKVLSYQTETAGEVSEGNSSVSGTYNQEKLDEMLAASLAAEED 180

Query: 3221 RGFIGDASTSGAGVLAXXXXXXXXXXEMLLPTLQGKVDPAVLASLPPSMQLDLLVQMRER 3042
              F+GD     AG+            EM+LP + GKVDPAVLA+LPPSMQLDLLVQMRE+
Sbjct: 181  GNFVGD-----AGISNEEDDDDDEDEEMMLPIMNGKVDPAVLAALPPSMQLDLLVQMREK 235

Query: 3041 LMAENRQKYQKVKKAPARFSELQIEAYLKTVAFRREIDEVQKAAGGRGIGGVKTSRIASE 2862
            LMAENRQKYQKVKKAPA FSELQI+AYLKTVAFRREIDEVQK+A GRG+GGV+TSRIASE
Sbjct: 236  LMAENRQKYQKVKKAPAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTSRIASE 295

Query: 2861 ANREFIFSSSFTGNRQSLASAGGEANGDVQSEIATRLPXXXXXXXXXXXXXSNSAIESIM 2682
            ANRE+IFSSSFTG++++L + G E NGD Q +I T  P             SN+A ES+ 
Sbjct: 296  ANREYIFSSSFTGDKEALTNGGVEKNGDKQYQIPTECP-PDSPNNVASTSKSNTAAESVA 354

Query: 2681 NEPRKAFNEDVETYMDERGRVRVSKVRAMGIRMTRDLQRNLDLMKEIEHDRIDPGRMSND 2502
             EP   FN+DVETY+DERGRVRVS+VRAMGIRMTRDLQRNLDLMKEIE DR +       
Sbjct: 355  GEPASVFNDDVETYLDERGRVRVSRVRAMGIRMTRDLQRNLDLMKEIEQDRTN------- 407

Query: 2501 RIDPGRMSNDRISDRKATVFPSRLPESSKISGTSHQGQSGCSNETNQESIPVSGTSIEVF 2322
                         D    V                       N+TN++SIP +G SIE+ 
Sbjct: 408  ------------EDNNGIV---------------------TLNKTNEQSIPDNGASIEIS 434

Query: 2321 FEDDNKQQSVDSDDDVFARIVAGDPLLTSSADNTSSAKQPSTTLSDCEWEEGIPRDMKG- 2145
            FEDD +   ++ DD++FA +VAG+P++ SS+D   S ++P+ + SD +WEEGI  +  G 
Sbjct: 435  FEDDGEHNCLNGDDELFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEGIIEEKGGS 494

Query: 2144 ---------KRLLSGCRTSDESEVEWEEGPSGNPELGSACEVEYRETVSKGDLLEEADFQ 1992
                     K  +   R SD+SEVEWEEGP    +  SAC  ++    SKG L EE D Q
Sbjct: 495  CIDNVGVEIKPSVMEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQ 554

Query: 1991 EAIRRSMDDMRCQKDIDASSAPEEFKDDKNMATEFAVTVPGYLVKDTNAPRLPSESLLPN 1812
            EAIRRS++D+  +K +      E FKD                +K+ +  +L        
Sbjct: 555  EAIRRSLEDLGGEKAVG-----ESFKDSD--------------IKEYDEKKL-------- 587

Query: 1811 KPSAAIVSGVHDGVDNVDETKTKKANSSLTIQLEATTSNDPNLMEV---QMSTFYQSDLK 1641
                          D+VD   T ++  +   QL +   ++P+ MEV   ++   YQ D+ 
Sbjct: 588  --------------DSVDGMNTSQSIDASGRQLTSLLEDNPHKMEVLNNELCEEYQKDV- 632

Query: 1640 YHPELSIRDANDDQNFQGETGHVGVVNQTKENGIELSNEVHEDNCRGNAETL-NCFSSTA 1464
                             GE+G+VG   +T E  +      H      +  TL N  S   
Sbjct: 633  -----------------GESGNVG--RETNEVYMIREQLSHASKKSVDTSTLANSCSGDG 673

Query: 1463 TYIFNSPDIGMPDVPLADAQPCELKALVNDHISETTELK----ETAVKESESDFDNVHKV 1296
            ++I ++    MPD   AD+   + +A    H +ETT+      ET +K   +      K+
Sbjct: 674  SHISDAMLGNMPDATPADSSKYDSEAAPTWHSNETTDPAIPPGETCIKGKTA---VEQKL 730

Query: 1295 TEERDSNAFYEQREDDVNKIVLTDMSEEQVVITKASLEEEMTNLTKERTDLGDEQRRLER 1116
             E  +   F+ ++E ++   V  D    Q  +T+  LEE M  L +E  +LGDEQR+LER
Sbjct: 731  AEGNNHVNFFMEKERNMGNSVTEDKKNVQFGVTEDVLEEMMI-LDQECLNLGDEQRKLER 789

Query: 1115 NAESVSGEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELENLVDGVVTDDSDVLLFGAR 936
            NA+ VS EMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDV LFGAR
Sbjct: 790  NADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGAR 849

Query: 935  SVYKNIFDDRKYVETYFMKDIEKELGLTREKLIRMAMLLGSDYTEGISGIGIVNAVEVLN 756
            SVYKNIFD+RKYVETYFMKDIE ELGL REK+IRMA+LLGSDYTEG+SGIGIVNA+EVLN
Sbjct: 850  SVYKNIFDERKYVETYFMKDIETELGLNREKVIRMALLLGSDYTEGVSGIGIVNAIEVLN 909

Query: 755  AFPEEDGLQKFREWIESPDPTILGKVDAKEVSSTRKRGSNSSAEEASTVNQGVINSDDDI 576
            +FPEEDGL KFREW+ESPDP ILGKV+ +  SS+RKRGS  +             S DDI
Sbjct: 910  SFPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKRGSKHN------------ESVDDI 957

Query: 575  HRMKQIFMDKHRNVSKNWHIPSTFPSDAVISAYASPQVDKSTEPFSWGKPDLFVLRKLCW 396
               KQIFMDKHRNVSKNWHIPS+FPS+ VISAYASPQVD+STEPFSWGKPDLFVLRKLC 
Sbjct: 958  QSGKQIFMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQSTEPFSWGKPDLFVLRKLCL 1017

Query: 395  EKFGWGTQKADELLQPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRISRAVKGIAGSKT 216
            EKFGWG QKADELL PVLKEYNKHETQLRLEAFYTFNERFAKIRSKRI +AVKGI GS+T
Sbjct: 1018 EKFGWGNQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQT 1077

Query: 215  SELMDHNELDATSXXXXXXXXXXXXKTDVAKEQLSTLDESTPTEKSELSIQEGGRKNTKE 36
            SEL+D    + +                 +KE  S LD      K E+ I E G    + 
Sbjct: 1078 SELLDDAVQEGSKRGKR------------SKESPSKLD-----NKQEIPINEIGSTAARN 1120

Query: 35   GSS 27
            GS+
Sbjct: 1121 GSN 1123


>dbj|BAK08020.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1503

 Score = 1004 bits (2595), Expect = 0.0
 Identities = 596/1247 (47%), Positives = 777/1247 (62%), Gaps = 57/1247 (4%)
 Frame = -2

Query: 3761 MGVHGLWDLLSPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDERGEMVRNAHILGFFR 3582
            MGVHGLW LL+PVGRRVSVETLAGKRLA+DASIWM+QFM+AMRD++G+MVR+AHILGF R
Sbjct: 1    MGVHGLWGLLAPVGRRVSVETLAGKRLAVDASIWMVQFMRAMRDDKGDMVRDAHILGFLR 60

Query: 3581 RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQTKIRKTAEKLLLNHLKAMRLK 3402
            RICKLLFLR +PVFVFDG TPALKRRT+ ARRR R+ AQ K+RKTAEKLL++HLKA RL+
Sbjct: 61   RICKLLFLRARPVFVFDGATPALKRRTLAARRRNRDAAQAKVRKTAEKLLISHLKASRLE 120

Query: 3401 ELANDLENQRKSNGDKGKRVITGKADLAGTTSNTNSPDTKG---------FDQEALDAML 3249
            ELA  +++ R  +  K K++ + + +    T    + +  G          +QE LD +L
Sbjct: 121  ELAAQIKSDRAKHDAKDKQIESSRGEETEKTDGDQNQNDDGENSRGAVAPINQEKLDELL 180

Query: 3248 AASIEAEEGRGFIGDASTSGAGV-----LAXXXXXXXXXXEMLLPTLQGKVDPAVLASLP 3084
            AAS+ AE+  G IG    + A V                 EM+ P   G +DPAVLASLP
Sbjct: 181  AASLAAEDEAGLIGKGEHNPASVPLQEGTGIDEEENDDDEEMIFPMTTGDIDPAVLASLP 240

Query: 3083 PSMQLDLLVQMRERLMAENRQKYQKVKKAPARFSELQIEAYLKTVAFRREIDEVQKAAGG 2904
            PS+QLDLLVQMRER+MAENRQKYQK+KK PA+FSELQI++YLKTVAFRREI+EV+K A G
Sbjct: 241  PSIQLDLLVQMRERVMAENRQKYQKIKKEPAKFSELQIQSYLKTVAFRREIEEVRKGAAG 300

Query: 2903 RGIGGVKTSRIASEANREFIFSSSFTGNRQSLASAGGEA----NGDVQSEIATRLPXXXX 2736
            + +GG++TS+IASEANREFIFSSSFTG++Q+LA  G E     +G  + EI++ +     
Sbjct: 301  KDVGGIQTSKIASEANREFIFSSSFTGDKQTLAQRGVEEQIVDSGKSKREISSAI----- 355

Query: 2735 XXXXXXXXXSNSAIESIMNEPRKAFNEDVETYMDERGRVRVSKVRAMGIRMTRDLQRNLD 2556
                     S+ +I+    EP   F  DVETY DERGR+RVS+VR MGIRMTRD+QRNLD
Sbjct: 356  --FKSSPSSSSRSIKPQSGEPSTGFGPDVETYRDERGRIRVSRVRGMGIRMTRDIQRNLD 413

Query: 2555 LMKEIEHDRIDPGRMSNDRIDPGRMSNDRISDRKATVFPSRLPESS--------KISGTS 2400
             +KE E  +     M    I  G  SN+   D    +F +   +SS        +  G +
Sbjct: 414  FIKEHEQAK----SMGQANIGKGSTSNEEPPDFPEHLFENDGLQSSVGLSEDFAETIGDN 469

Query: 2399 HQGQS--GCSNETNQESIPVSGTSIEVFFEDDNKQQSVDSDDDVFARIVAGDPLLTSSAD 2226
            H   S  G S++ ++ S   S  +IE+ FEDD      D+DD +F  +V+G      + D
Sbjct: 470  HHTSSLVGGSDDISEGSCHGSKETIEISFEDDQIGVK-DNDDKLFLNLVSGTSSKLFADD 528

Query: 2225 NTSSAKQPSTTLSDCEWEEGIPR-------DMKGKRLLSGCRTSDESEVEWEEGPSGNPE 2067
            +  +     +  S+  WEEGI         D K  + L       + EVEWEEG    PE
Sbjct: 529  DRLAKNTEESDNSEGIWEEGIIEETLSVKVDEKDHQSLPPDNCCTDDEVEWEEGVCDVPE 588

Query: 2066 LGSACEVEYRETVSKGDLLEEADFQEAIRRSMDDMRCQKDIDASSAPEEFKDDKNMATEF 1887
            + S  E    + + KGD+ EEA  QEAI+RS++D          S  +E+++        
Sbjct: 589  VPSISEYNQCK-LPKGDIEEEALIQEAIKRSLED----------SGKQEYENG------- 630

Query: 1886 AVTVPGYLVKDTNAPRLPSESLLPNKPSAAIVSGVHD----GVDNVDETKTKKANSSLTI 1719
               +P  L   +    L S   +P    A   +  H     G + + E + K ++     
Sbjct: 631  ---IPEDLQISSEDKSLQSHDDVPKSSEAPAKTYCHSEASFGNETIKEVRIKDSSG---- 683

Query: 1718 QLEATTSNDPNLMEVQMSTFYQSDLKYHPELSIRDANDDQNF---QGETGHVGVVNQTKE 1548
              E    +DP ++E +     + + +   +L   D     N    +G +    V   T  
Sbjct: 684  --EDGVMHDPEVLEAE-----RKENEKQAQLESNDGRACTNTDYPRGSSPVYDVSTSTHT 736

Query: 1547 NGIELSNEVHEDNCRGNAETLNCFSSTATYIFNSPDIGMPDVPLADAQPCELKALVNDH- 1371
             G   S +V +++   +A +++ F        N+            +   +L    NDH 
Sbjct: 737  AGPSCSPKVQDNDAIVSAASIHEFPKEEVIKQNT------------SNSHKLACNTNDHY 784

Query: 1370 ------ISETTELKETAVKESESDFDNVHKVTEERDSNAFYEQREDDVNKIVLTDMSEEQ 1209
                  +S+   L +  V +     +NV  + E+ ++         ++N   L + S+  
Sbjct: 785  IGEISMVSQKGPLMDELVADDAIQKENV--IQEDMNTTT------SEINSTQLNENSDSH 836

Query: 1208 VVITKASLEEEMTNLTKERTDLGDEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPM 1029
            + I++ +LE+E++ L +E+ DLG+E+R+LE +AESVS EMFAECQELLQMFGLPYIIAPM
Sbjct: 837  I-ISENNLEDEISFLRQEQVDLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPM 895

Query: 1028 EAEAQCAYMELENLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIEKELGLTR 849
            EAEAQCAYME+ NLVDGVVTDDSDV LFGAR+VYKNIFDDRKYVETY MKDIE ELGLTR
Sbjct: 896  EAEAQCAYMEINNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYLMKDIESELGLTR 955

Query: 848  EKLIRMAMLLGSDYTEGISGIGIVNAVEVLNAFPEEDGLQKFREWIESPDPTILGKVDAK 669
            E+LIRMAMLLGSDYTEGISGIGIVNA+EV++AFPEEDGLQ+FREWIESPDP ILGK D +
Sbjct: 956  EQLIRMAMLLGSDYTEGISGIGIVNAIEVVHAFPEEDGLQQFREWIESPDPAILGKFDVE 1015

Query: 668  EVSST--RKRGSNSSAEEASTVNQGVINSDD------DIHRMKQIFMDKHRNVSKNWHIP 513
               S+  RK G N S E+ +++    +   D      +   +K++FM  HRNVSKNWHIP
Sbjct: 1016 SSGSSKRRKSGGNESCEKGNSLEPECVEGSDNNQSSNETQHIKEVFMSNHRNVSKNWHIP 1075

Query: 512  STFPSDAVISAYASPQVDKSTEPFSWGKPDLFVLRKLCWEKFGWGTQKADELLQPVLKEY 333
            STFPS+ VI+AY SPQVD STE FSWG+PDL +LRKLCWE+FGW  +KADELL PVLKEY
Sbjct: 1076 STFPSETVINAYISPQVDDSTERFSWGRPDLSLLRKLCWERFGWNKEKADELLLPVLKEY 1135

Query: 332  NKHETQLRLEAFYTFNERFAKIRSKRISRAVKGIAGSKTSELMDHNE 192
            NKHETQLR+EAFY+FNERFAKIRSKRI +A+KGI G   SE  + NE
Sbjct: 1136 NKHETQLRMEAFYSFNERFAKIRSKRIQKAIKGITGKTFSETDELNE 1182


>ref|XP_002468313.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
            gi|241922167|gb|EER95311.1| hypothetical protein
            SORBIDRAFT_01g043560 [Sorghum bicolor]
          Length = 1489

 Score =  990 bits (2560), Expect = 0.0
 Identities = 605/1318 (45%), Positives = 792/1318 (60%), Gaps = 65/1318 (4%)
 Frame = -2

Query: 3761 MGVHGLWDLLSPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDERGEMVRNAHILGFFR 3582
            MGVHGLW+LL+PVGRRVSVETLAGKR+A+DASIWM+QFM+AMRD+ GEMVR+AH+LGF R
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKRVAVDASIWMVQFMRAMRDDSGEMVRDAHLLGFLR 60

Query: 3581 RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQTKIRKTAEKLLLNHLKAMRLK 3402
            RICKLLFLR +PVFVFDG TPALKRRT+ ARRR R+ AQ K+RKTAEKLLL+HLKA +L+
Sbjct: 61   RICKLLFLRVRPVFVFDGATPALKRRTLAARRRHRDAAQAKVRKTAEKLLLSHLKARKLE 120

Query: 3401 ELANDLENQRKSNGDKGKRVITGKADLAGTTSNTNSPDTK-------GFDQEALDAMLAA 3243
            ELA  + + R  +  KGK+V + K      TS     DT          +QE +D MLAA
Sbjct: 121  ELAEQIRSDRAKHDAKGKQVESSKEGETEKTSQNQIGDTNNSEGNAASINQEKVDEMLAA 180

Query: 3242 SIEAEEGRGFIGDASTSGAGVL----AXXXXXXXXXXEMLLPTLQGKVDPAVLASLPPSM 3075
            S+ AEE   F  +       V     A           M+ P   G +DPAVLASLPPSM
Sbjct: 181  SLAAEEEADFTDEGKHHFTSVPLPEGAEIDEDEDDDEGMIFPMTTGDIDPAVLASLPPSM 240

Query: 3074 QLDLLVQMRERLMAENRQKYQKVKKAPARFSELQIEAYLKTVAFRREIDEVQKAAGGRGI 2895
            QLDLLVQMRER+MAENRQKYQK+KK PA+FSELQI++YLKTVAFRREID+VQK+A G+G 
Sbjct: 241  QLDLLVQMRERVMAENRQKYQKIKKEPAKFSELQIQSYLKTVAFRREIDQVQKSAAGKGG 300

Query: 2894 GGVKTSRIASEANREFIFSSSFTGNRQSLASAGGE----ANGDVQSEIATRLPXXXXXXX 2727
            GGV+TS+IASEANREFIFSSSFTG++Q LA    +     N   + EI + +        
Sbjct: 301  GGVQTSKIASEANREFIFSSSFTGDKQMLAQRREKEHNVENTKSKKEINSSVFTSNPTNS 360

Query: 2726 XXXXXXSNSAIESIMNEPRKAFNEDVETYMDERGRVRVSKVRAMGIRMTRDLQRNLDLMK 2547
                   NS      ++P + F  DVETY DERGR+RVS+VRAMGIRMTRD+QRNLD +K
Sbjct: 361  LGTMKPPNS------SKPSRDFGPDVETYRDERGRIRVSRVRAMGIRMTRDIQRNLDFIK 414

Query: 2546 EIEHDRIDPGRMSNDRIDPGRMSNDRISDRKATVFPSRLPESSKISGTSHQGQ--SGCSN 2373
              E++++     +   +  G   N+     +  VFP  L ES+K+  + +  +  S    
Sbjct: 415  --ENEQVKSKGQTQTSVHNGSTGNE-----EPPVFPEHLFESNKLQSSCNPDEDLSETDR 467

Query: 2372 ETNQESIPVSGT-------------SIEVFFEDDNKQQSVDSDDDVFARIVAGDPLLTSS 2232
            E +Q S  V                +IE+ F  D  +   D D+D+F ++V+G      S
Sbjct: 468  ENHQTSSQVEAADNISESSCHGNKEAIEISFSVDQTELK-DGDEDIFLQLVSGSTSNMFS 526

Query: 2231 ADNTSSAKQPSTTLSDCEWEEGI------PRDM-KGKRLLSGCRTSDESEVEWEEGPSGN 2073
             +N        +  S+C WE+G+      P  + K     S      + E+EWEEG S  
Sbjct: 527  GNNCLVKNTEESEDSECIWEDGVIEAGTSPMKVGKNDHKSSLPENCSDDEMEWEEGDSFA 586

Query: 2072 PELGSACEVEYRETVSKGDLLEEADFQEAIRRSMDDMRCQKDIDASSAP-EEFKDDKNMA 1896
            P + S+ E        KGDL E A  QEAIRRS++D   +   + S+   +E  +D+++ 
Sbjct: 587  PGVASSSE-HNPCNAPKGDLEEAALVQEAIRRSLEDFEKKASENVSTGDIQESVEDRSL- 644

Query: 1895 TEFAVTVPGY---LVKDTNAPRLPSESLLPNKPSAAIVSGVHDGVDNVDETKTKKANSSL 1725
             +F+  VP     L ++ +   +P    + N+    I     D V         +  +  
Sbjct: 645  -QFSNNVPKISEALGENDSHSGVPVVEEINNETRTEINCDKDDMVQGTGLLGIDRQENET 703

Query: 1724 TIQLEATTSNDPNLMEVQMSTFYQSDLKYHPELSIR-DANDDQNFQGETGHVGVVNQTKE 1548
              QL     ND +L  V + T + S+L   P  S   +  D   F  +     V +  K 
Sbjct: 704  RPQL---VKNDGHLGSVPLCTTFTSNLAEKPSNSTEANGEDVMIFTTKLPGTAVGDCDKT 760

Query: 1547 NGIELSNEVHEDNCRGNAETLNCFSSTATYIFNSPDIGMPDVPLADAQPCELKALVNDHI 1368
            + + + N          ++  N  +ST   + +  D+                 L+++ +
Sbjct: 761  SNLNIMNS-------DQSKCSNDIASTGETLSHQKDL-----------------LIDELL 796

Query: 1367 SETTELKETAVKESESDFDNVHKVTEERDSNAFYEQREDDVNKIVLTDMSEEQVVITKAS 1188
            ++T E KE A +       ++   T E D    Y Q  D          +++   I+ + 
Sbjct: 797  ADTAEQKENATQV------DLKFATSEID----YTQICD----------NDDNHTISASY 836

Query: 1187 LEEEMTNLTKERTDLGDEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPMEAEAQCA 1008
            ++ E++ L +E+ DLG E+R+LE +AESVS EMFAECQELLQMFGLPYIIAP EAEAQCA
Sbjct: 837  VDAELSRLRQEQIDLGHERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPTEAEAQCA 896

Query: 1007 YMELENLVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIEKELGLTREKLIRMA 828
            YME+ NLVDGVVTDDSDV LFGAR+VYKNIFDDRKYVETYFMKDIE ELGLTRE+LIRMA
Sbjct: 897  YMEINNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIESELGLTREQLIRMA 956

Query: 827  MLLGSDYTEGISGIGIVNAVEVLNAFPEEDGLQKFREWIESPDPTILGK--VDAKEVSST 654
            +LLGSDYTEG+SGIGIVNA+EV++AFPEEDGLQKF+EWIESPDP+I GK  V+A   S  
Sbjct: 957  LLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLQKFKEWIESPDPSIFGKLHVEASGRSKK 1016

Query: 653  RKRGSNSSAEEASTVNQGVINSDDD------IHRMKQIFMDKHRNVSKNWHIPSTFPSDA 492
            RK G N S  +   +    I   DD         +K+IFM KHRNVSKNWHIP+TFPS++
Sbjct: 1017 RKLGGNDSDGKGKGLEPECIQGSDDKQSSNEAEHVKEIFMSKHRNVSKNWHIPATFPSES 1076

Query: 491  VISAYASPQVDKSTEPFSWGKPDLFVLRKLCWEKFGWGTQKADELLQPVLKEYNKHETQL 312
            V++AY SPQVD S EPFSWG+PDL +LRKLCWE+FGWG +KADELL PVL+EYNKHETQL
Sbjct: 1077 VVNAYISPQVDNSMEPFSWGRPDLGLLRKLCWERFGWGKEKADELLIPVLREYNKHETQL 1136

Query: 311  RLEAFYTFNERFAKIRSKRISRAVKGIAGS-------------KTSELMDHNELDATS-X 174
            R+EAFY+FNERFAKIRSKRI +A+KGI G               TS+ +   E +++S  
Sbjct: 1137 RMEAFYSFNERFAKIRSKRIKKAIKGITGKSFLDTDEPEPDNPSTSKTIKKKEANSSSHA 1196

Query: 173  XXXXXXXXXXXKTDVAKEQLSTLDESTPTEKSELSIQEGGRKNTKEGSSVG-DRGRGR 3
                         ++  ++ +  D ++  +  E++ +       K GS  G  +GRGR
Sbjct: 1197 RGRGKRKNNSGIRNMESQEDNVGDTNSLADTVEITRENNNTTKRKRGSPCGRSKGRGR 1254


>ref|NP_566830.1| DNA repair protein UVH3 [Arabidopsis thaliana]
            gi|56749787|sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA
            repair protein UVH3; AltName: Full=ERCC5 homolog;
            AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3;
            Short=AtXPG; AltName: Full=UV hypersensitive protein 3;
            AltName: Full=XPG homolog gi|13649704|gb|AAK37472.1| UV
            hypersensitive protein [Arabidopsis thaliana]
            gi|332643872|gb|AEE77393.1| DNA repair protein UVH3
            [Arabidopsis thaliana]
          Length = 1479

 Score =  988 bits (2554), Expect = 0.0
 Identities = 630/1351 (46%), Positives = 802/1351 (59%), Gaps = 98/1351 (7%)
 Frame = -2

Query: 3761 MGVHGLWDLLSPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDERGEMVRNAHILGFFR 3582
            MGV GLW+LL+PVGRRVSVETLA KRLAIDASIWM+QF+KAMRDE+G+MV+NAH++GFFR
Sbjct: 1    MGVQGLWELLAPVGRRVSVETLANKRLAIDASIWMVQFIKAMRDEKGDMVQNAHLIGFFR 60

Query: 3581 RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQTKIRKTAEKLLLNHLKAMRLK 3402
            RICKLLFLRTKP+FVFDG TPALKRRTVIARRRQRENAQTKIRKTAEKLLLN LK +RLK
Sbjct: 61   RICKLLFLRTKPIFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNRLKDIRLK 120

Query: 3401 ELANDLENQ--RKSNGDKGKRVITG------------------------------KADLA 3318
            E A D++NQ  ++ + D+ K+ ++                               +A L 
Sbjct: 121  EQAKDIKNQRLKQDDSDRVKKRVSSDSVEDNLRVPVEEDDVGASFFQEEKLDEVSQASLV 180

Query: 3317 GTT--------SNTNSPDTKGF--------------------DQEALDAMLAASIEAEEG 3222
            G T        S  + P  KG                      QE LD MLAAS+ AEE 
Sbjct: 181  GETGVDDVVKESVKDDPKGKGVLLDGDDLDNLVQDSSVQGKDYQEKLDEMLAASLAAEEE 240

Query: 3221 RGFIGDASTSGAGVLAXXXXXXXXXXE--MLLPTLQGKVDPAVLASLPPSMQLDLLVQMR 3048
            R F   ASTS A + +          +  +LLP + G +DPAVLASLPPSMQLDLL QMR
Sbjct: 241  RNFTSKASTSAAAIPSEEDEEEDSDGDEEILLPVMDGNIDPAVLASLPPSMQLDLLAQMR 300

Query: 3047 ERLMAENRQKYQKVKKAPARFSELQIEAYLKTVAFRREIDEVQKAAGGRGIGGVKTSRIA 2868
            E+LMAENRQKYQKVKKAP +FSELQIEAYLKTVAFRREI+EVQ++AGGR +GGV+TSRIA
Sbjct: 301  EKLMAENRQKYQKVKKAPEKFSELQIEAYLKTVAFRREINEVQRSAGGRAVGGVQTSRIA 360

Query: 2867 SEANREFIFSSSFTGNRQSLASAGGEANGDVQSEIATRLPXXXXXXXXXXXXXSNSAIES 2688
            SEANREFIFSSSF G+++ LASA  E   D   +  ++               S++ IE 
Sbjct: 361  SEANREFIFSSSFAGDKEVLASAR-EGRNDENQKKTSQQSLPVSVKNASPLKKSDATIEL 419

Query: 2687 IMNEPRKAFNEDVETYMDERGRVRVSKVRAMGIRMTRDLQRNLDLMKEIEHDRIDPGRMS 2508
              +EP+   +E++E Y+DERGR R+   R MGI+MTRD+QRNL LMKE E  R   G M+
Sbjct: 420  DRDEPKNP-DENIEVYIDERGRFRIRN-RHMGIQMTRDIQRNLHLMKEKE--RTASGSMA 475

Query: 2507 NDRIDPGRMSNDRISDRKATVFPSRLPESSKISGTSHQGQSGCSNETNQESIPVSGTSIE 2328
             +        N    D+    F  + P    +     Q         N +S+    +SIE
Sbjct: 476  KNDETFSAWENFPTEDQ----FLEKSPVEKDVVDLEIQ---------NDDSMLHPPSSIE 522

Query: 2327 VFFEDDNKQQSVDSDDDVFARIVAGDPLLTSSADNTSSAKQPSTTLSDCEWEEGIPRDMK 2148
            + F+ D   + ++ +DD+F ++ AG P+  SS +N    +  S   SD +WEE +P +  
Sbjct: 523  ISFDHDGGGKDLNDEDDMFLQLAAGGPVTISSTENDPK-EDTSPWASDSDWEE-VPVEQN 580

Query: 2147 GKRLLSGCRTSDE---------SEVEWEEGPSGNPELGSACEVEYRETVSKGDLLEEADF 1995
                      S++           V WEE    N    ++ E +    ++KG L EEAD 
Sbjct: 581  TSVSKLEANLSNQHIPKDISIAEGVAWEEYSCKNAN--NSVENDTVTKITKGYLEEEADL 638

Query: 1994 QEAIRRSMDDMRCQKDIDASSAPEEFKDDKNMATEFAVTVPGY--LVKDTNAPRLPSESL 1821
            QEAI++S+ ++  ++  D        ++++++     V  P    L           E  
Sbjct: 639  QEAIKKSLLELHDKESGDV------LEENQSVRVNLVVDKPSEDSLCSRETVGEAEEERF 692

Query: 1820 LPN----KPSAAI-------VSGVHDGVDNVDE----------TKTKKANSSLTIQLEAT 1704
            L      K S AI       V+G  DG   + +               A S+   ++++ 
Sbjct: 693  LDEITILKTSGAISEQSNTSVAGNADGQKGITKQFGTHPSSGSNNVSHAVSNKLSKVKSV 752

Query: 1703 TSNDPNLMEVQMSTFYQSDLKYHPELSIRDANDDQNFQGETGHVGVVNQTKENGIELSNE 1524
             S +  L     +    +  K H E         ++F GE+  V  +    E      +E
Sbjct: 753  ISPEKALNVASQNRMLSTMAKQHNE------EGSESFGGESVKVSAMPIADEEITGFLDE 806

Query: 1523 VHEDNCRGNAETLNCFSSTATYIFNSPDIGMPDVPLADAQPCELKALVNDHISETTELKE 1344
              +DN  G +  +                 M D    D    ++++LV +    +  +  
Sbjct: 807  --KDNADGESSIM-----------------MDDK--RDYSRRKIQSLVTESRDPSRNVVR 845

Query: 1343 TAVKESESDFDNVHKVTEERDSNAFYEQREDDVNKIVLTDMSEEQVVI--TKASLEEEMT 1170
            + +     D D+ ++  EE +SN      E   N    TD  E+ V +  ++A++EEE+ 
Sbjct: 846  SRIGILH-DTDSQNERREENNSN------EHTFNIDSSTDFEEKGVPVEFSEANIEEEIR 898

Query: 1169 NLTKERTDLGDEQRRLERNAESVSGEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELEN 990
             L +E   LGDEQR+LERNAESVS EMFAECQELLQ+FG+PYIIAPMEAEAQCA+ME  N
Sbjct: 899  VLDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAFMEQSN 958

Query: 989  LVDGVVTDDSDVLLFGARSVYKNIFDDRKYVETYFMKDIEKELGLTREKLIRMAMLLGSD 810
            LVDG+VTDDSDV LFGARSVYKNIFDDRKYVETYFMKDIEKELGL+R+K+IRMAMLLGSD
Sbjct: 959  LVDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEKELGLSRDKIIRMAMLLGSD 1018

Query: 809  YTEGISGIGIVNAVEVLNAFPEEDGLQKFREWIESPDPTILGKVDAKEVSSTRKRGSNSS 630
            YTEGISGIGIVNA+EV+ AFPEEDGLQKFREW+ESPDPTILGK DAK  S  +KRGS   
Sbjct: 1019 YTEGISGIGIVNAIEVVTAFPEEDGLQKFREWVESPDPTILGKTDAKTGSKVKKRGS--- 1075

Query: 629  AEEASTVNQGVIN--SDDDIHRMKQIFMDKHRNVSKNWHIPSTFPSDAVISAYASPQVDK 456
               AS  N+G+I+  S DD   +KQIFMD+HR VSKNWHIP TFPS+AVISAY +PQVD 
Sbjct: 1076 ---ASVDNKGIISGASTDDTEEIKQIFMDQHRKVSKNWHIPLTFPSEAVISAYLNPQVDL 1132

Query: 455  STEPFSWGKPDLFVLRKLCWEKFGWGTQKADELLQPVLKEYNKHETQLRLEAFYTFNERF 276
            STE FSWGKPDL VLRKLCWEKF W  +K DELL PVLKEY K ETQLR+EAFY+FNERF
Sbjct: 1133 STEKFSWGKPDLSVLRKLCWEKFNWNGKKTDELLLPVLKEYEKRETQLRIEAFYSFNERF 1192

Query: 275  AKIRSKRISRAVKGIAGSKTSELMDHNELDATSXXXXXXXXXXXXKTDVAKEQLSTLDES 96
            AKIRSKRI++AVKGI G  +S++ DH   +               K  VA  +  T D +
Sbjct: 1193 AKIRSKRINKAVKGIGGGLSSDVADHTLQEG---------PRKRNKKKVAPHE--TEDNN 1241

Query: 95   TPTEKSELSIQEGGRKNTKEGSSVGDRGRGR 3
            T  + S ++ ++   K  +       RGRGR
Sbjct: 1242 TSDKDSPIANEKVKNKRKRLEKPSSSRGRGR 1272