BLASTX nr result

ID: Atractylodes21_contig00029009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029009
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266...   365   7e-99
emb|CBI23729.3| unnamed protein product [Vitis vinifera]              355   8e-96
gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum]     350   2e-94
ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|2...   348   9e-94
ref|XP_004134396.1| PREDICTED: DNA mismatch repair protein MSH1,...   325   1e-86

>ref|XP_002282256.1| PREDICTED: uncharacterized protein LOC100266612 [Vitis vinifera]
          Length = 1144

 Score =  365 bits (938), Expect = 7e-99
 Identities = 191/277 (68%), Positives = 222/277 (80%), Gaps = 5/277 (1%)
 Frame = -3

Query: 822  VQQKSMFLLTGPNGGGKSSLLRSICAAALLGVCGFMIPAESASIPHFDSIMLHIKSYDSP 643
            V  KS+FLLTGPNGGGKSSLLRSICAAALLG+CGFM+PAESA IPHFDSIMLH+KSYDSP
Sbjct: 757  VDMKSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAESALIPHFDSIMLHMKSYDSP 816

Query: 642  ADGKSLFQIEMSEMRSITTRATSKSLVLVDEICRGTETAKGACIAGSIIETLDSIGCLGV 463
            ADGKS FQIEMSEMRSI T ATS+SLVL+DEICRGTETAKG CIAGSI+ETLD IGCLG+
Sbjct: 817  ADGKSSFQIEMSEMRSIITGATSRSLVLIDEICRGTETAKGTCIAGSIVETLDKIGCLGI 876

Query: 462  VSTHLHDIFNLPLTTKNTVYKAMGSDYVNGKTKPTWKLIDGICKESLAFETAQKEGVPKE 283
            VSTHLH IF L L TKN + KAMG++YV+GKTKPTWKLIDGIC+ESLAFETAQKEG+P+ 
Sbjct: 877  VSTHLHGIFTLGLNTKNAICKAMGTEYVDGKTKPTWKLIDGICRESLAFETAQKEGIPET 936

Query: 282  IIQRAEELYNSVYTKDLNLGKSNTKV----QPPPSKGSHKACNQL-QLTGIQEVPISCTS 118
            II+RAEELY S+++KDL  G++ T++           S +  NQL ++TG    P     
Sbjct: 937  IIRRAEELYLSIHSKDLLSGRNETELGHFCLDTTVNTSGEVYNQLSRITGGTICP---KI 993

Query: 117  ESTNQMEKFRKDVENAVCIVCHRKLIELCKTKTAPEV 7
            ESTN+ME   K VE+AV IVC +KL EL K K   ++
Sbjct: 994  ESTNEMEVLHKKVESAVTIVCQKKLKELYKQKNTSKL 1030


>emb|CBI23729.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  355 bits (912), Expect = 8e-96
 Identities = 184/272 (67%), Positives = 211/272 (77%)
 Frame = -3

Query: 822  VQQKSMFLLTGPNGGGKSSLLRSICAAALLGVCGFMIPAESASIPHFDSIMLHIKSYDSP 643
            V  KS+FLLTGPNGGGKSSLLRSICAAALLG+CGFM+PAESA IPHFDSIMLH+KSYDSP
Sbjct: 757  VDMKSLFLLTGPNGGGKSSLLRSICAAALLGICGFMVPAESALIPHFDSIMLHMKSYDSP 816

Query: 642  ADGKSLFQIEMSEMRSITTRATSKSLVLVDEICRGTETAKGACIAGSIIETLDSIGCLGV 463
            ADGKS FQIEMSEMRSI T ATS+SLVL+DEICRGTETAKG CIAGSI+ETLD IGCLG+
Sbjct: 817  ADGKSSFQIEMSEMRSIITGATSRSLVLIDEICRGTETAKGTCIAGSIVETLDKIGCLGI 876

Query: 462  VSTHLHDIFNLPLTTKNTVYKAMGSDYVNGKTKPTWKLIDGICKESLAFETAQKEGVPKE 283
            VSTHLH IF L L TKN + KAMG++YV+GKTKPTWKLIDGIC+ESLAFETAQKEG+P+ 
Sbjct: 877  VSTHLHGIFTLGLNTKNAICKAMGTEYVDGKTKPTWKLIDGICRESLAFETAQKEGIPET 936

Query: 282  IIQRAEELYNSVYTKDLNLGKSNTKVQPPPSKGSHKACNQLQLTGIQEVPISCTSESTNQ 103
            II+RAEELY S+++KDL  G +               C ++              ESTN+
Sbjct: 937  IIRRAEELYLSIHSKDLITGGT--------------ICPKI--------------ESTNE 968

Query: 102  MEKFRKDVENAVCIVCHRKLIELCKTKTAPEV 7
            ME   K VE+AV IVC +KL EL K K   ++
Sbjct: 969  MEVLHKKVESAVTIVCQKKLKELYKQKNTSKL 1000


>gb|AAX53097.1| DNA mismatch repair protein [Solanum lycopersicum]
          Length = 1124

 Score =  350 bits (899), Expect = 2e-94
 Identities = 175/274 (63%), Positives = 218/274 (79%), Gaps = 2/274 (0%)
 Frame = -3

Query: 822  VQQKSMFLLTGPNGGGKSSLLRSICAAALLGVCGFMIPAESASIPHFDSIMLHIKSYDSP 643
            V  +SMFLLTGPNGGGKSSLLRS+CAAALLG+CGFM+PAESA IPHFDSIMLH+KSYDSP
Sbjct: 752  VDMQSMFLLTGPNGGGKSSLLRSLCAAALLGMCGFMVPAESAVIPHFDSIMLHMKSYDSP 811

Query: 642  ADGKSLFQIEMSEMRSITTRATSKSLVLVDEICRGTETAKGACIAGSIIETLDSIGCLGV 463
             DGKS FQIEMSE+RS+ T ATS+SLVL+DEICRGTETAKG CIAGS+IETLD IGCLG+
Sbjct: 812  VDGKSSFQIEMSEIRSLITGATSRSLVLIDEICRGTETAKGTCIAGSVIETLDEIGCLGI 871

Query: 462  VSTHLHDIFNLPLTTKNTVYKAMGSDYVNGKTKPTWKLIDGICKESLAFETAQKEGVPKE 283
            VSTHLH IF+LPL  K TVYKAMG++YV+G+  PTWKLIDGICKESLAFETAQ+EG+P+ 
Sbjct: 872  VSTHLHGIFDLPLKIKKTVYKAMGAEYVDGQPIPTWKLIDGICKESLAFETAQREGIPEI 931

Query: 282  IIQRAEELYNSVYTKDLNLGKSNTKVQPPPSKGSHKACNQL--QLTGIQEVPISCTSEST 109
            +IQRAEELYNS Y     + +   +++P  S     + +    QL G +++ +  +++  
Sbjct: 932  LIQRAEELYNSAYGN--QIPRKIDQIRPLCSDIDLNSTDNSSDQLNGTRQIALDSSTKLM 989

Query: 108  NQMEKFRKDVENAVCIVCHRKLIELCKTKTAPEV 7
            ++M    K +E+A+C++C +KLIEL K K   E+
Sbjct: 990  HRMGISSKKLEDAICLICEKKLIELYKMKNPSEM 1023


>ref|XP_002314510.1| predicted protein [Populus trichocarpa] gi|222863550|gb|EEF00681.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  348 bits (894), Expect = 9e-94
 Identities = 176/273 (64%), Positives = 219/273 (80%), Gaps = 1/273 (0%)
 Frame = -3

Query: 822  VQQKSMFLLTGPNGGGKSSLLRSICAAALLGVCGFMIPAESASIPHFDSIMLHIKSYDSP 643
            V  +S+FLLTGPNGGGKSSLLRSICA+ALLG+CG M+PAESA IP+FDSIMLH+KSYDSP
Sbjct: 757  VDMQSLFLLTGPNGGGKSSLLRSICASALLGICGLMVPAESALIPNFDSIMLHMKSYDSP 816

Query: 642  ADGKSLFQIEMSEMRSITTRATSKSLVLVDEICRGTETAKGACIAGSIIETLDSIGCLGV 463
            ADGKS FQ+EMSE+RS+ T A+S+SLVLVDEICRGTETAKGACIAGSI+ETLD IGCLG+
Sbjct: 817  ADGKSSFQVEMSEIRSLVTGASSRSLVLVDEICRGTETAKGACIAGSIVETLDRIGCLGI 876

Query: 462  VSTHLHDIFNLPLTTKNTVYKAMGSDYVNGKTKPTWKLIDGICKESLAFETAQKEGVPKE 283
            VSTHLH IF+LPL T NTVYKAMG++YV+G+TKPTW+LIDGIC+ESLAFETA+KEG+P+ 
Sbjct: 877  VSTHLHGIFDLPLDTSNTVYKAMGTEYVDGRTKPTWRLIDGICRESLAFETAKKEGIPES 936

Query: 282  IIQRAEELYNSVYTKDLNLGK-SNTKVQPPPSKGSHKACNQLQLTGIQEVPISCTSESTN 106
            IIQRAE+LY S Y K  +  +  N   +   S G+  + +          P + ++++ +
Sbjct: 937  IIQRAEDLYFSAYAKGFSSDRIVNDSDEAHLSSGTTASLH----------PSTHSTKAVD 986

Query: 105  QMEKFRKDVENAVCIVCHRKLIELCKTKTAPEV 7
             +EK  KD+ENA+ ++C +KLIEL K K   EV
Sbjct: 987  TVEK--KDIENAITMICQKKLIELYKQKNTSEV 1017


>ref|XP_004134396.1| PREDICTED: DNA mismatch repair protein MSH1, mitochondrial-like
            [Cucumis sativus]
          Length = 1122

 Score =  325 bits (832), Expect = 1e-86
 Identities = 165/272 (60%), Positives = 201/272 (73%), Gaps = 5/272 (1%)
 Frame = -3

Query: 822  VQQKSMFLLTGPNGGGKSSLLRSICAAALLGVCGFMIPAESASIPHFDSIMLHIKSYDSP 643
            ++ +S+FLLTGPNGGGKSSLLRSICAA LLG+CGFM+PAESA IPHFDSIMLH+KS+DSP
Sbjct: 732  IEMESLFLLTGPNGGGKSSLLRSICAATLLGICGFMVPAESALIPHFDSIMLHMKSFDSP 791

Query: 642  ADGKSLFQIEMSEMRSITTRATSKSLVLVDEICRGTETAKGACIAGSIIETLDSIGCLGV 463
            ADGKS FQ+EMSEMRSI  R T +SLVL+DEICRGTETAKG CIAGSIIE LD  GCLG+
Sbjct: 792  ADGKSSFQVEMSEMRSIVNRVTERSLVLIDEICRGTETAKGTCIAGSIIEALDKAGCLGI 851

Query: 462  VSTHLHDIFNLPLTTKNTVYKAMGSDYVNGKTKPTWKLIDGICKESLAFETAQKEGVPKE 283
            VSTHLH IF+LPL T+N VYKAMG+    G+T PTWKLI GIC+ESLAFETA+ EG+ + 
Sbjct: 852  VSTHLHGIFDLPLDTQNIVYKAMGTVSAEGRTVPTWKLISGICRESLAFETAKNEGISEA 911

Query: 282  IIQRAEELYNSVYTKDLNLGKSNTKV-----QPPPSKGSHKACNQLQLTGIQEVPISCTS 118
            IIQRAE+LY S Y K+   GK  T +       P   G+    + L+  G+        +
Sbjct: 912  IIQRAEDLYLSNYAKEGISGKETTDLNFFVSSHPSLNGNGTGKSNLKSNGVIVKADQPKT 971

Query: 117  ESTNQMEKFRKDVENAVCIVCHRKLIELCKTK 22
            E+T++     K +E A+  +C +KLIE  + K
Sbjct: 972  ETTSKTGVLWKKLERAITKICQKKLIEFHRDK 1003


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