BLASTX nr result

ID: Atractylodes21_contig00029000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00029000
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79540.1| hypothetical protein VITISV_016973 [Vitis vinifera]    80   1e-13
gb|ABA93551.1| hypothetical protein LOC_Os11g28590 [Oryza sativa...    76   3e-12
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      76   3e-12
gb|ADB85375.1| putative retrotransposon protein [Phyllostachys e...    76   3e-12
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    76   3e-12

>emb|CAN79540.1| hypothetical protein VITISV_016973 [Vitis vinifera]
          Length = 699

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/52 (69%), Positives = 44/52 (84%)
 Frame = +1

Query: 79  MSSMKYDLPLLDRNTRFPLWQVKMRDVLVQMDLHKTLLGFEKMPASWSNEEK 234
           M++MKYD+P LDRNT+F LWQVKMR +L+QMDL  TLLGF KMP+ W+ EEK
Sbjct: 1   MATMKYDIPFLDRNTKFSLWQVKMRIMLMQMDLDDTLLGFNKMPSLWTLEEK 52


>gb|ABA93551.1| hypothetical protein LOC_Os11g28590 [Oryza sativa Japonica Group]
          Length = 149

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = +1

Query: 79  MSSMKYDLPLLDRNTRFPLWQVKMRDVLVQMDLHKTLLGFEKMPASWSNEEK 234
           M+S+KYDLPLLDR+TRF LWQVKMR VL Q DL   L GF+K    WSN+EK
Sbjct: 1   MASLKYDLPLLDRDTRFSLWQVKMRAVLTQQDLDDALSGFDKRTQDWSNDEK 52


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = +1

Query: 79  MSSMKYDLPLLDRNTRFPLWQVKMRDVLVQMDLHKTLLGFEKMPASWSNEEK 234
           M+S+KYDLPLLDR+TRF LWQVKMR VL Q DL   L GF+K    WSN+EK
Sbjct: 36  MASLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWSNDEK 87


>gb|ADB85375.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 142

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/52 (67%), Positives = 41/52 (78%)
 Frame = +1

Query: 79  MSSMKYDLPLLDRNTRFPLWQVKMRDVLVQMDLHKTLLGFEKMPASWSNEEK 234
           M ++KYDLPLL R+TRF LWQVKMR VL QMDL  TL GFEK P +W+ +EK
Sbjct: 1   METLKYDLPLLGRDTRFSLWQVKMRAVLAQMDLDDTLEGFEKQPITWTADEK 52


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = +1

Query: 79  MSSMKYDLPLLDRNTRFPLWQVKMRDVLVQMDLHKTLLGFEKMPASWSNEEK 234
           M+S+KYDLPLLDR+TRF LWQVKMR VL Q DL   L GF+K    WSN+EK
Sbjct: 36  MASLKYDLPLLDRDTRFSLWQVKMRAVLAQQDLDDALSGFDKRTQDWSNDEK 87


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