BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028886
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310025.1| hypothetical protein POPTRDRAFT_562704 [Popu...    72   1e-10
gb|EEC70113.1| hypothetical protein OsI_00772 [Oryza sativa Indi...    69   1e-09
sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA ...    69   2e-09
gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japo...    69   2e-09
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...    68   2e-09

>ref|XP_002310025.1| hypothetical protein POPTRDRAFT_562704 [Populus trichocarpa]
           gi|222852928|gb|EEE90475.1| hypothetical protein
           POPTRDRAFT_562704 [Populus trichocarpa]
          Length = 305

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
 Frame = -3

Query: 236 SQQSLILSELEFRKLFMVHSYIGSNKLEVAVSVEDAIYIKSMKTIPMLDFEDWMWSKFG- 60
           SQ  + L ELEFRK F++ SY+G   LE  VSV+    I+  K +PM  FE  +W  FG 
Sbjct: 147 SQHLVALGELEFRKAFLILSYLGGKNLEEVVSVDQ---IRGYKDLPMRTFESKIWEAFGC 203

Query: 59  -RRYCQPCDRAMYLDWDSGK 3
            R Y +  DR  YLDWDSGK
Sbjct: 204 RRDYIKEEDRVKYLDWDSGK 223


>gb|EEC70113.1| hypothetical protein OsI_00772 [Oryza sativa Indica Group]
          Length = 1155

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 36/77 (46%), Positives = 48/77 (62%)
 Frame = -3

Query: 236 SQQSLILSELEFRKLFMVHSYIGSNKLEVAVSVEDAIYIKSMKTIPMLDFEDWMWSKFGR 57
           S Q L L EL FRK+FMV +Y+ S K+E  +SV+   YI+S+K + M+ FE  +W  FG 
Sbjct: 282 SPQMLALEELGFRKIFMVFAYLASEKIENVLSVD---YIRSLKFLSMVQFESQIWRTFGH 338

Query: 56  RYCQPCDRAMYLDWDSG 6
           +Y    DRA  LD D G
Sbjct: 339 KYIAASDRAKNLDSDPG 355


>sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 3; Short=OsRDR3
          Length = 1153

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/77 (46%), Positives = 47/77 (61%)
 Frame = -3

Query: 236 SQQSLILSELEFRKLFMVHSYIGSNKLEVAVSVEDAIYIKSMKTIPMLDFEDWMWSKFGR 57
           S Q L L EL FRK+FMV +Y+ S K+E  +SV+   YI+S+K + M  FE  +W  FG 
Sbjct: 289 SPQMLALEELGFRKIFMVFAYLASEKIENVLSVD---YIRSLKFLSMAQFESQIWRTFGH 345

Query: 56  RYCQPCDRAMYLDWDSG 6
           +Y    DRA  LD D G
Sbjct: 346 KYIAASDRAKNLDSDPG 362


>gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japonica Group]
          Length = 1243

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/77 (46%), Positives = 47/77 (61%)
 Frame = -3

Query: 236 SQQSLILSELEFRKLFMVHSYIGSNKLEVAVSVEDAIYIKSMKTIPMLDFEDWMWSKFGR 57
           S Q L L EL FRK+FMV +Y+ S K+E  +SV+   YI+S+K + M  FE  +W  FG 
Sbjct: 343 SPQMLALEELGFRKIFMVFAYLASEKIENVLSVD---YIRSLKFLSMAQFESQIWRTFGH 399

Query: 56  RYCQPCDRAMYLDWDSG 6
           +Y    DRA  LD D G
Sbjct: 400 KYIAASDRAKNLDSDPG 416


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 981

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
 Frame = -3

Query: 344 SCSPSASH-CGSVEKKLFAPFSPPTPNYLSCTSNYKISQ--QSLILSELEFRKLFMVHSY 174
           S SPS  H C  +++++      P+P  L    N       Q + L ELEF+K F++ SY
Sbjct: 99  SRSPSGRHVCRVLQEEMSVDSDAPSPKSLKSEENGGSLHIPQLVALGELEFKKAFLLLSY 158

Query: 173 IGSNKLEVAVSVEDAIYIKSMKTIPMLDFEDWMWSKFGRRYCQPCDRAMYLDWDSGK 3
           I   +L    + ++   I+  K +PM+ +E  +W + GRRYC   DR M L WDSGK
Sbjct: 159 IPGQQLGQVTTADE---IRLWKDLPMVAYEAAVWDRLGRRYCPQTDRRM-LQWDSGK 211