BLASTX nr result

ID: Atractylodes21_contig00028883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028883
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   266   2e-69
ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   261   1e-67
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   261   1e-67
emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]   261   1e-67
ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|2...   251   1e-64

>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  266 bits (681), Expect = 2e-69
 Identities = 135/227 (59%), Positives = 157/227 (69%), Gaps = 9/227 (3%)
 Frame = +1

Query: 4   YGTLKDLQILRGSQQTSKGCAFVKYETKEQAVAAIEGLNGKHKMEGSMVPLVVKWADTEK 183
           YGT+KDLQILRGSQQTSKGCAF+KYETKEQA+AA+E +NGKHKMEGS VPLVVKWADTEK
Sbjct: 126 YGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEK 185

Query: 184 ERXXXXXXXXXXXXXXXXXXDPTQHPSLFGALPMGYISPYNGYGYQAAGSYGLMQYRLPP 363
           ER                  D +QHPSLFGALPMGY+  YNGYGYQA G+YGLM YRLPP
Sbjct: 186 ERQARRAQKVQSQASNLPNAD-SQHPSLFGALPMGYVPQYNGYGYQAPGTYGLMPYRLPP 244

Query: 364 GQNQPSFPNVIAHANQGNVFRGGT---------PRSYSVPAAGYLGSAYPAVPGAQYPLA 516
            Q+QP+F ++I   NQGN  RGG          PR+Y++P A Y+GSAYPAVPG QYP+A
Sbjct: 245 LQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALPPASYVGSAYPAVPGIQYPMA 304

Query: 517 YPGGMMSNRXXXXXXXXXXXXXANNLAATXXXXXXXLGDQVEGPPGA 657
           YPGGMMS R              ++ +AT        G Q+EGPPG+
Sbjct: 305 YPGGMMSPRPLSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPPGS 351


>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  261 bits (666), Expect = 1e-67
 Identities = 130/227 (57%), Positives = 155/227 (68%), Gaps = 8/227 (3%)
 Frame = +1

Query: 1   QYGTLKDLQILRGSQQTSKGCAFVKYETKEQAVAAIEGLNGKHKMEGSMVPLVVKWADTE 180
           +YGT+KDLQILRGSQQTSKGCAF+KYETKEQA+AA+E +NGKHKMEGS VPLVVKWADTE
Sbjct: 135 KYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 194

Query: 181 KERXXXXXXXXXXXXXXXXXXDPTQHPSLFGALPMGYISPYNGYGYQAAGSYGLMQYRLP 360
           KER                  D  QHPSLFGALP+GY+ PYNGYGYQA G+YGLMQYR+P
Sbjct: 195 KERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRMP 254

Query: 361 PGQNQPSFPNVIAHANQGNVF--------RGGTPRSYSVPAAGYLGSAYPAVPGAQYPLA 516
           P Q+Q +F N+I   NQG+          R   PR+Y+VP+A Y+GSAYPA+PG QYP+A
Sbjct: 255 PMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYPMA 314

Query: 517 YPGGMMSNRXXXXXXXXXXXXXANNLAATXXXXXXXLGDQVEGPPGA 657
           Y GG+MS++               + + T        G QVEGPPGA
Sbjct: 315 YHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGA 361


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  261 bits (666), Expect = 1e-67
 Identities = 130/227 (57%), Positives = 155/227 (68%), Gaps = 8/227 (3%)
 Frame = +1

Query: 1   QYGTLKDLQILRGSQQTSKGCAFVKYETKEQAVAAIEGLNGKHKMEGSMVPLVVKWADTE 180
           +YGT+KDLQILRGSQQTSKGCAF+KYETKEQA+AA+E +NGKHKMEGS VPLVVKWADTE
Sbjct: 125 KYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 184

Query: 181 KERXXXXXXXXXXXXXXXXXXDPTQHPSLFGALPMGYISPYNGYGYQAAGSYGLMQYRLP 360
           KER                  D  QHPSLFGALP+GY+ PYNGYGYQA G+YGLMQYR+P
Sbjct: 185 KERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRMP 244

Query: 361 PGQNQPSFPNVIAHANQGNVF--------RGGTPRSYSVPAAGYLGSAYPAVPGAQYPLA 516
           P Q+Q +F N+I   NQG+          R   PR+Y+VP+A Y+GSAYPA+PG QYP+A
Sbjct: 245 PMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYPMA 304

Query: 517 YPGGMMSNRXXXXXXXXXXXXXANNLAATXXXXXXXLGDQVEGPPGA 657
           Y GG+MS++               + + T        G QVEGPPGA
Sbjct: 305 YHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGA 351


>emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
          Length = 450

 Score =  261 bits (666), Expect = 1e-67
 Identities = 130/227 (57%), Positives = 155/227 (68%), Gaps = 8/227 (3%)
 Frame = +1

Query: 1   QYGTLKDLQILRGSQQTSKGCAFVKYETKEQAVAAIEGLNGKHKMEGSMVPLVVKWADTE 180
           +YGT+KDLQILRGSQQTSKGCAF+KYETKEQA+AA+E +NGKHKMEGS VPLVVKWADTE
Sbjct: 179 KYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTE 238

Query: 181 KERXXXXXXXXXXXXXXXXXXDPTQHPSLFGALPMGYISPYNGYGYQAAGSYGLMQYRLP 360
           KER                  D  QHPSLFGALP+GY+ PYNGYGYQA G+YGLMQYR+P
Sbjct: 239 KERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRMP 298

Query: 361 PGQNQPSFPNVIAHANQGNVF--------RGGTPRSYSVPAAGYLGSAYPAVPGAQYPLA 516
           P Q+Q +F N+I   NQG+          R   PR+Y+VP+A Y+GSAYPA+PG QYP+A
Sbjct: 299 PMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPALPGLQYPMA 358

Query: 517 YPGGMMSNRXXXXXXXXXXXXXANNLAATXXXXXXXLGDQVEGPPGA 657
           Y GG+MS++               + + T        G QVEGPPGA
Sbjct: 359 YHGGIMSHQPLSGSPGSRPPAMMTSNSPTNSGAGASSGGQVEGPPGA 405


>ref|XP_002320377.1| predicted protein [Populus trichocarpa] gi|222861150|gb|EEE98692.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  251 bits (640), Expect = 1e-64
 Identities = 132/228 (57%), Positives = 153/228 (67%), Gaps = 9/228 (3%)
 Frame = +1

Query: 1   QYGTLKDLQILRGSQQTSKGCAFVKYETKEQAVAAIEGLNGKHKMEGSMVPLVVKWADTE 180
           +YGT+KDLQILRGSQQTSK CAF+KYETKEQA+AA+E +NGKHKMEGS VPLVVKWADTE
Sbjct: 126 KYGTIKDLQILRGSQQTSKSCAFLKYETKEQALAALEDINGKHKMEGSSVPLVVKWADTE 185

Query: 181 KERXXXXXXXXXXXXXXXXXXDPTQHPSLFGALPMGYISPYNGYGYQAAGSYGLMQYRLP 360
           KER                    +QHPSLFGALPMGY  PYNGYGYQA G YGLM YRLP
Sbjct: 186 KER---QARRAQKAQSQAMPNTDSQHPSLFGALPMGYAPPYNGYGYQAPGVYGLMPYRLP 242

Query: 361 PGQNQPSFPNVIAHANQGNVFRGG---------TPRSYSVPAAGYLGSAYPAVPGAQYPL 513
           P QNQP+F +++   NQGNV RGG         +PR+Y+   A Y+GSAYP V G QYP+
Sbjct: 243 PMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYA--PATYMGSAYPTVTGLQYPV 300

Query: 514 AYPGGMMSNRXXXXXXXXXXXXXANNLAATXXXXXXXLGDQVEGPPGA 657
           AYPG MM++R              ++ +AT        G QVEGPPGA
Sbjct: 301 AYPGAMMTHRPLSSSPGALSPTVVSSNSATPSGVGGSSGVQVEGPPGA 348


Top