BLASTX nr result
ID: Atractylodes21_contig00028875
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00028875 (340 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu... 98 8e-19 ref|XP_004171554.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 94 9e-18 ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 94 9e-18 ref|XP_003602366.1| RNA-binding protein [Medicago truncatula] gi... 93 3e-17 ref|XP_003602365.1| RNA-binding protein [Medicago truncatula] gi... 93 3e-17 >gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum] Length = 269 Score = 97.8 bits (242), Expect = 8e-19 Identities = 44/47 (93%), Positives = 45/47 (95%) Frame = -3 Query: 338 SRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTKTYIRVRRYDG 198 SRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWT+TYIRVR Y G Sbjct: 149 SRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVREYKG 195 >ref|XP_004171554.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis sativus] Length = 158 Score = 94.4 bits (233), Expect = 9e-18 Identities = 40/47 (85%), Positives = 45/47 (95%) Frame = -3 Query: 338 SRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTKTYIRVRRYDG 198 SRDSEGTFG+VDYTNY+DMKYAIRKLDDTEFRNPW + YIRV++YDG Sbjct: 30 SRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG 76 >ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like [Cucumis sativus] Length = 248 Score = 94.4 bits (233), Expect = 9e-18 Identities = 40/47 (85%), Positives = 45/47 (95%) Frame = -3 Query: 338 SRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTKTYIRVRRYDG 198 SRDSEGTFG+VDYTNY+DMKYAIRKLDDTEFRNPW + YIRV++YDG Sbjct: 138 SRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKYDG 184 >ref|XP_003602366.1| RNA-binding protein [Medicago truncatula] gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula] Length = 273 Score = 92.8 bits (229), Expect = 3e-17 Identities = 40/46 (86%), Positives = 45/46 (97%) Frame = -3 Query: 338 SRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTKTYIRVRRYD 201 SRDSEGTFGLVDYTNY+DMKYAIRKLDDTEFRNPW ++YIRVR+Y+ Sbjct: 155 SRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 200 >ref|XP_003602365.1| RNA-binding protein [Medicago truncatula] gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula] Length = 272 Score = 92.8 bits (229), Expect = 3e-17 Identities = 40/46 (86%), Positives = 45/46 (97%) Frame = -3 Query: 338 SRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTKTYIRVRRYD 201 SRDSEGTFGLVDYTNY+DMKYAIRKLDDTEFRNPW ++YIRVR+Y+ Sbjct: 155 SRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKYE 200