BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028768
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM08130.1|AF324348_1 putative DNA repair protein XRCC1 [Arab...   285   1e-74
ref|NP_178158.2| DNA-repair protein XRCC1 [Arabidopsis thaliana]...   284   2e-74
dbj|BAF00808.1| DNA repair protein like XRCC1 [Arabidopsis thali...   283   6e-74
emb|CBI36187.3| unnamed protein product [Vitis vinifera]              280   5e-73
ref|XP_002887830.1| hypothetical protein ARALYDRAFT_895951 [Arab...   279   8e-73

>gb|AAM08130.1|AF324348_1 putative DNA repair protein XRCC1 [Arabidopsis thaliana]
           gi|11181954|emb|CAC16136.1| putative DNA repair protein
           XRCC1 [Arabidopsis thaliana]
          Length = 353

 Score =  285 bits (729), Expect = 1e-74
 Identities = 148/260 (56%), Positives = 180/260 (69%), Gaps = 7/260 (2%)
 Frame = -3

Query: 764 RNLPSWMSSRDAD---EKSVHKEPEDD--KDKRQGKPHASQTTTSSESSIGANKSSKLLE 600
           RNLPSWMSSRD +    KS  K+P+D+   ++   +   S  +  +E S    + SKL+E
Sbjct: 5   RNLPSWMSSRDPEITPSKSHCKKPKDEGPTEEHNSRNAPSNKSEHAEPSSNTTEFSKLME 64

Query: 599 GVVFVLSGFVNPERSTLRSQALEMGAEYQADWNTNCTLLVCAFPNTPKFRQVEADNGTIV 420
           GVVFVLSGFVNPERSTLRSQAL MGA YQ DWN   TLL+CAFPNTPKFRQVE + GTI+
Sbjct: 65  GVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPNTPKFRQVETNGGTII 124

Query: 419 SKDWITECYNQKQLVGIEPYLLHAGKPWRHHSGPSGASQDPKRSSSKDSYKQVDKSADLK 240
           SK+WITECY QK+LV IE YL+HAGKPWR  S P  A+++ +   SK   KQV+K  + +
Sbjct: 125 SKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANREKREHLSKKPEKQVEKKTETR 184

Query: 239 LRP--XXXXXXXXXXXKNEFPTSEVKKWAIDDMKRTISWLNSQEEKPDPGEIKTIAAEGI 66
             P             K  F  +EVKKWA DD+ +TISWL SQEEKP+PGEIK IAAEG+
Sbjct: 185 GTPSTSSKNRSACNLVKEPFSVTEVKKWARDDLSQTISWLESQEEKPEPGEIKRIAAEGV 244

Query: 65  LTCLQDAIDCLMEGQGMGKI 6
           LTCLQDAID L + Q +G +
Sbjct: 245 LTCLQDAIDSLEQKQDIGSV 264


>ref|NP_178158.2| DNA-repair protein XRCC1 [Arabidopsis thaliana]
           gi|30699510|ref|NP_850985.1| DNA-repair protein XRCC1
           [Arabidopsis thaliana] gi|145327761|ref|NP_001077856.1|
           DNA-repair protein XRCC1 [Arabidopsis thaliana]
           gi|90093286|gb|ABD85156.1| At1g80420 [Arabidopsis
           thaliana] gi|332198280|gb|AEE36401.1| DNA-repair protein
           XRCC1 [Arabidopsis thaliana] gi|332198281|gb|AEE36402.1|
           DNA-repair protein XRCC1 [Arabidopsis thaliana]
           gi|332198282|gb|AEE36403.1| DNA-repair protein XRCC1
           [Arabidopsis thaliana]
          Length = 353

 Score =  284 bits (727), Expect = 2e-74
 Identities = 147/260 (56%), Positives = 180/260 (69%), Gaps = 7/260 (2%)
 Frame = -3

Query: 764 RNLPSWMSSRDAD---EKSVHKEPEDD--KDKRQGKPHASQTTTSSESSIGANKSSKLLE 600
           RNLPSWMSSRD +    KS  K+P+D+   ++   +   S  +  +E S    + SKL+E
Sbjct: 5   RNLPSWMSSRDPEITPSKSHCKKPKDEGPTEEHNSRNAPSNKSEHAEPSSNTTEFSKLME 64

Query: 599 GVVFVLSGFVNPERSTLRSQALEMGAEYQADWNTNCTLLVCAFPNTPKFRQVEADNGTIV 420
           GVVFVLSGFVNPERSTLRSQAL MGA YQ DWN   TLL+CAFPNTPKFRQVE + GTI+
Sbjct: 65  GVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPNTPKFRQVETNGGTII 124

Query: 419 SKDWITECYNQKQLVGIEPYLLHAGKPWRHHSGPSGASQDPKRSSSKDSYKQVDKSADLK 240
           SK+WITECY QK+LV IE YL+HAGKPWR  S P  A+++ +   SK   KQV+K  + +
Sbjct: 125 SKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANREKREHLSKKPEKQVEKKTETR 184

Query: 239 LRPXXXXXXXXXXXKNEFP--TSEVKKWAIDDMKRTISWLNSQEEKPDPGEIKTIAAEGI 66
             P             + P   +EVKKWA DD+ +TISWL SQEEKP+PGEIK IAAEG+
Sbjct: 185 GTPSTSSKNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESQEEKPEPGEIKRIAAEGV 244

Query: 65  LTCLQDAIDCLMEGQGMGKI 6
           LTCLQDAID L + Q +G +
Sbjct: 245 LTCLQDAIDSLEQKQDIGSV 264


>dbj|BAF00808.1| DNA repair protein like XRCC1 [Arabidopsis thaliana]
          Length = 353

 Score =  283 bits (723), Expect = 6e-74
 Identities = 146/260 (56%), Positives = 180/260 (69%), Gaps = 7/260 (2%)
 Frame = -3

Query: 764 RNLPSWMSSRDAD---EKSVHKEPEDD--KDKRQGKPHASQTTTSSESSIGANKSSKLLE 600
           RNLPSWMSSRD +    KS  K+P+D+   ++   +   S  +  +E S    + SKL+E
Sbjct: 5   RNLPSWMSSRDPEITPSKSHCKKPKDEGPTEEHNSRNAPSNKSEHAEPSSNTTEFSKLME 64

Query: 599 GVVFVLSGFVNPERSTLRSQALEMGAEYQADWNTNCTLLVCAFPNTPKFRQVEADNGTIV 420
           GVVFVLSGFVNPERSTLRSQAL MGA YQ DWN   TLL+CAFPNTPKFRQVE + GTI+
Sbjct: 65  GVVFVLSGFVNPERSTLRSQALTMGATYQPDWNAGSTLLICAFPNTPKFRQVETNGGTII 124

Query: 419 SKDWITECYNQKQLVGIEPYLLHAGKPWRHHSGPSGASQDPKRSSSKDSYKQVDKSADLK 240
           SK+WITECY QK+LV IE YL+HAGKPWR  S P  A+++ +   SK   KQV+K  + +
Sbjct: 125 SKEWITECYAQKKLVDIEQYLMHAGKPWRKSSSPQDANREKREHLSKKPEKQVEKKTETR 184

Query: 239 LRPXXXXXXXXXXXKNEFP--TSEVKKWAIDDMKRTISWLNSQEEKPDPGEIKTIAAEGI 66
             P             + P   +EVKKWA DD+ +TISWL S+EEKP+PGEIK IAAEG+
Sbjct: 185 GTPSTSSKNRSACNLVKEPFFVTEVKKWARDDLSQTISWLESREEKPEPGEIKRIAAEGV 244

Query: 65  LTCLQDAIDCLMEGQGMGKI 6
           LTCLQDAID L + Q +G +
Sbjct: 245 LTCLQDAIDSLEQKQDIGSV 264


>emb|CBI36187.3| unnamed protein product [Vitis vinifera]
          Length = 342

 Score =  280 bits (715), Expect = 5e-73
 Identities = 151/265 (56%), Positives = 183/265 (69%), Gaps = 10/265 (3%)
 Frame = -3

Query: 785 GSHKTTGRNLPSWMSSRDADEKSVHKEPED---DKDKRQG-KPHASQ------TTTSSES 636
           G++KT  R+LPSWMS  +   K+  K   D    +++++G KP  ++            S
Sbjct: 11  GANKTVKRSLPSWMSDIENGSKARGKRSGDGGGQEERKEGEKPEQAKGNGGKSNNRPGAS 70

Query: 635 SIGANKSSKLLEGVVFVLSGFVNPERSTLRSQALEMGAEYQADWNTNCTLLVCAFPNTPK 456
           ++  +  S LLEGVVFVLSGFVNPERSTLRSQALEMGAEYQ DWN+NCTLLVCAFPNTPK
Sbjct: 71  NLSTSNFSNLLEGVVFVLSGFVNPERSTLRSQALEMGAEYQPDWNSNCTLLVCAFPNTPK 130

Query: 455 FRQVEADNGTIVSKDWITECYNQKQLVGIEPYLLHAGKPWRHHSGPSGASQDPKRSSSKD 276
           FRQVEAD GTIVSK+W++ECYNQK+L  IE YL+HAGKPWR  + P  A  D + S   +
Sbjct: 131 FRQVEADCGTIVSKEWLSECYNQKKLADIEIYLMHAGKPWRRSNVPHQAKNDEEASPPSN 190

Query: 275 SYKQVDKSADLKLRPXXXXXXXXXXXKNEFPTSEVKKWAIDDMKRTISWLNSQEEKPDPG 96
           S  QV++    KL             K+ F  SEVKKWAIDD+ +TISWL+SQEEKP+P 
Sbjct: 191 SKMQVERGLRSKL---TASKSGSNPAKDLFSPSEVKKWAIDDLHKTISWLDSQEEKPEPS 247

Query: 95  EIKTIAAEGILTCLQDAIDCLMEGQ 21
           EIK IAA GILTCLQDAID L + Q
Sbjct: 248 EIKKIAAGGILTCLQDAIDSLGQKQ 272


>ref|XP_002887830.1| hypothetical protein ARALYDRAFT_895951 [Arabidopsis lyrata subsp.
           lyrata] gi|297333671|gb|EFH64089.1| hypothetical protein
           ARALYDRAFT_895951 [Arabidopsis lyrata subsp. lyrata]
          Length = 356

 Score =  279 bits (713), Expect = 8e-73
 Identities = 150/264 (56%), Positives = 179/264 (67%), Gaps = 5/264 (1%)
 Frame = -3

Query: 782 SHKTTGRNLPSWMSSRDADE---KSVHKEPEDDKDKRQGKPHASQTTTSSESSIGANKSS 612
           SHK   RNLPSWMSSRD      KS  K+P+D++   +  P  S  +  +E S    + S
Sbjct: 2   SHK---RNLPSWMSSRDPQTSPGKSHCKKPKDEEHNSRNAP--SNKSEHAEPSSSTTEFS 56

Query: 611 KLLEGVVFVLSGFVNPERSTLRSQALEMGAEYQADWNTNCTLLVCAFPNTPKFRQVEADN 432
           KL+EGVVFVLSG VNPERSTLRSQAL MGA YQ DWN++ TLL+CAFPNTPKFRQVE + 
Sbjct: 57  KLMEGVVFVLSGLVNPERSTLRSQALTMGATYQPDWNSDSTLLICAFPNTPKFRQVETNG 116

Query: 431 GTIVSKDWITECYNQKQLVGIEPYLLHAGKPWRHHSGPSGASQDPKRSSSKDSYKQVDKS 252
           GTIVSKDWITECY QK+LV IE YL+HAGKPWR  +    A Q+     SK   KQV+K 
Sbjct: 117 GTIVSKDWITECYTQKKLVDIEQYLMHAGKPWRKSNVRQNAIQENSEHRSKKPEKQVEKK 176

Query: 251 ADLKLRP--XXXXXXXXXXXKNEFPTSEVKKWAIDDMKRTISWLNSQEEKPDPGEIKTIA 78
            + +  P             K  F  +EVKKWA DD+ +TISWL SQEEKP+P EIK IA
Sbjct: 177 TETRGTPSTSSKNRSACNLVKEPFSVTEVKKWARDDLTQTISWLESQEEKPEPAEIKRIA 236

Query: 77  AEGILTCLQDAIDCLMEGQGMGKI 6
           AEG+LTCLQDAI+ L + Q +G +
Sbjct: 237 AEGVLTCLQDAIESLEQKQDIGSV 260