BLASTX nr result

ID: Atractylodes21_contig00028733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028733
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus...   167   1e-39
ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 ...   162   2e-38
ref|XP_002305996.1| high mobility group family [Populus trichoca...   159   2e-37
ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-...   159   3e-37
gb|AFK38905.1| unknown [Medicago truncatula]                          154   7e-36

>ref|XP_002519708.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223541125|gb|EEF42681.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 198

 Score =  167 bits (422), Expect = 1e-39
 Identities = 76/94 (80%), Positives = 90/94 (95%)
 Frame = -3

Query: 482 RPKMAVAKKKASKLDANKPKKPPTAFFYFLEDFRKDFQEQNPDVKSMREIGKACGEKWKI 303
           +PK  ++K++ +KLD+ KPKKPPTAFFYFLEDFRKDFQ+QNPDVKSMREIGKACGEKWK+
Sbjct: 93  KPKR-ISKRQIAKLDSKKPKKPPTAFFYFLEDFRKDFQKQNPDVKSMREIGKACGEKWKM 151

Query: 302 MTYEEKVQYYDVATEKRAEFEKAMADYVKKKESG 201
           MTYEEKV+YYD+ATEKRAEF+KAMA+Y+KKKESG
Sbjct: 152 MTYEEKVKYYDIATEKRAEFDKAMAEYIKKKESG 185


>ref|XP_002275908.1| PREDICTED: high mobility group B protein 14 [Vitis vinifera]
           gi|297740668|emb|CBI30850.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  162 bits (411), Expect = 2e-38
 Identities = 72/90 (80%), Positives = 85/90 (94%)
 Frame = -3

Query: 470 AVAKKKASKLDANKPKKPPTAFFYFLEDFRKDFQEQNPDVKSMREIGKACGEKWKIMTYE 291
           A  KK++ ++D+ KPKKPPTAFFYFLEDFRK+FQEQNPDVKSMR+IGKACGEKWK MTYE
Sbjct: 74  AKTKKRSQRVDSKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYE 133

Query: 290 EKVQYYDVATEKRAEFEKAMADYVKKKESG 201
           EKVQYYD+ATEKRAEF++AMADY+K++ESG
Sbjct: 134 EKVQYYDIATEKRAEFDRAMADYIKRQESG 163


>ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
           gi|222848960|gb|EEE86507.1| high mobility group family
           [Populus trichocarpa]
          Length = 165

 Score =  159 bits (403), Expect = 2e-37
 Identities = 73/95 (76%), Positives = 84/95 (88%)
 Frame = -3

Query: 485 KRPKMAVAKKKASKLDANKPKKPPTAFFYFLEDFRKDFQEQNPDVKSMREIGKACGEKWK 306
           +RPK    K K  K DA KPKKPPTAFFYFLEDFRK+FQEQNPDVKSMRE+GKACGEKWK
Sbjct: 60  RRPKSKTKKNK--KFDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWK 117

Query: 305 IMTYEEKVQYYDVATEKRAEFEKAMADYVKKKESG 201
            MTYEEKV+YYD+ATEKRAEF++A ++Y+K+KESG
Sbjct: 118 TMTYEEKVKYYDIATEKRAEFDRATSEYIKRKESG 152


>ref|XP_004134634.1| PREDICTED: high mobility group B protein 14-like [Cucumis sativus]
           gi|449505924|ref|XP_004162605.1| PREDICTED: high
           mobility group B protein 14-like [Cucumis sativus]
          Length = 161

 Score =  159 bits (401), Expect = 3e-37
 Identities = 73/97 (75%), Positives = 84/97 (86%)
 Frame = -3

Query: 491 TAKRPKMAVAKKKASKLDANKPKKPPTAFFYFLEDFRKDFQEQNPDVKSMREIGKACGEK 312
           T K+P  +  KKK  K D NKPKKPPTAFFYFL+DFRK+FQEQNPDVK+MR++GKACGEK
Sbjct: 53  TIKKPN-SKQKKKNDKFDVNKPKKPPTAFFYFLDDFRKEFQEQNPDVKTMRDVGKACGEK 111

Query: 311 WKIMTYEEKVQYYDVATEKRAEFEKAMADYVKKKESG 201
           WK MTYEEKVQYYD+ATEKRAEF+KAM +Y K+ ESG
Sbjct: 112 WKTMTYEEKVQYYDIATEKRAEFDKAMTEYKKRMESG 148


>gb|AFK38905.1| unknown [Medicago truncatula]
          Length = 152

 Score =  154 bits (389), Expect = 7e-36
 Identities = 70/90 (77%), Positives = 80/90 (88%)
 Frame = -3

Query: 470 AVAKKKASKLDANKPKKPPTAFFYFLEDFRKDFQEQNPDVKSMREIGKACGEKWKIMTYE 291
           AV KK   K+DA KPKKPPTAFFYFLEDFRK+F++QNPDVKSMR+IGKACGEKWK MT+E
Sbjct: 50  AVQKKNKQKIDAKKPKKPPTAFFYFLEDFRKEFKDQNPDVKSMRDIGKACGEKWKTMTFE 109

Query: 290 EKVQYYDVATEKRAEFEKAMADYVKKKESG 201
           EKVQYYD+ATEKRAEF++A  +Y KK ESG
Sbjct: 110 EKVQYYDIATEKRAEFDRATTEYNKKMESG 139


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