BLASTX nr result

ID: Atractylodes21_contig00028697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00028697
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB74453.1| transport inhibitor response protein [Prunus pers...    98   8e-19
emb|CBI21294.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002274892.1| PREDICTED: protein AUXIN SIGNALING F-BOX 3 [...    95   7e-18
ref|XP_002328871.1| f-box family protein [Populus trichocarpa] g...    91   7e-17
ref|XP_003553972.1| PREDICTED: protein AUXIN SIGNALING F-BOX 3-l...    91   1e-16

>gb|AFB74453.1| transport inhibitor response protein [Prunus persica]
          Length = 572

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 49/89 (55%), Positives = 65/89 (73%), Gaps = 6/89 (6%)
 Frame = +1

Query: 1   RNCPFGDIFL--EYGS--CMRSLWMSCCKTTLGGCKMIAQRTPSLNVEIINET--LEEYP 162
           R+CPFG++ L  + G    MRSLWMS C+ TLGGCK +A++ P LNVEIINE   +E   
Sbjct: 484 RDCPFGNMALLKDVGKYETMRSLWMSSCEVTLGGCKALAEKMPRLNVEIINENDQMELGL 543

Query: 163 DDDTRVDKLYMYQTLDGPRADTPTHIWTL 249
           DD+ +V+K+Y+Y+TL GPR DTP  +WTL
Sbjct: 544 DDEQQVEKMYLYRTLVGPRNDTPEFVWTL 572


>emb|CBI21294.3| unnamed protein product [Vitis vinifera]
          Length = 534

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 6/91 (6%)
 Frame = +1

Query: 1   RNCPFGDIFL--EYGS--CMRSLWMSCCKTTLGGCKMIAQRTPSLNVEIINE--TLEEYP 162
           R+CPFG++ L  + G    MRSLWMS C+ TLGGCK++A++ P +NVEIINE   +E   
Sbjct: 375 RDCPFGNVALLTDVGKYETMRSLWMSSCEVTLGGCKVLAEKMPRINVEIINEYDQMEFGF 434

Query: 163 DDDTRVDKLYMYQTLDGPRADTPTHIWTL*C 255
           DD  +VDK+++Y+TL GPR D P  +WT  C
Sbjct: 435 DDRQKVDKMFLYRTLVGPRKDAPHFVWTFSC 465


>ref|XP_002274892.1| PREDICTED: protein AUXIN SIGNALING F-BOX 3 [Vitis vinifera]
          Length = 572

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 6/89 (6%)
 Frame = +1

Query: 1   RNCPFGDIFL--EYGS--CMRSLWMSCCKTTLGGCKMIAQRTPSLNVEIINE--TLEEYP 162
           R+CPFG++ L  + G    MRSLWMS C+ TLGGCK++A++ P +NVEIINE   +E   
Sbjct: 484 RDCPFGNVALLTDVGKYETMRSLWMSSCEVTLGGCKVLAEKMPRINVEIINEYDQMEFGF 543

Query: 163 DDDTRVDKLYMYQTLDGPRADTPTHIWTL 249
           DD  +VDK+++Y+TL GPR D P  +WTL
Sbjct: 544 DDRQKVDKMFLYRTLVGPRKDAPHFVWTL 572


>ref|XP_002328871.1| f-box family protein [Populus trichocarpa]
           gi|222839301|gb|EEE77638.1| f-box family protein
           [Populus trichocarpa]
          Length = 571

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
 Frame = +1

Query: 1   RNCPFGD--IFLEYGS--CMRSLWMSCCKTTLGGCKMIAQRTPSLNVEIINET--LEEYP 162
           R+CPFG+  + ++ G    MRSLWMS C+ TLGGCK +A++ P LNVEIINE   ++   
Sbjct: 483 RDCPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKSLAKKMPRLNVEIINENDQMDASA 542

Query: 163 DDDTRVDKLYMYQTLDGPRADTPTHIWTL 249
           DD  +V+K+++Y+TL G R D P  +WTL
Sbjct: 543 DDRQKVEKMFLYRTLAGRREDAPEFVWTL 571


>ref|XP_003553972.1| PREDICTED: protein AUXIN SIGNALING F-BOX 3-like [Glycine max]
          Length = 572

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
 Frame = +1

Query: 1   RNCPFGDIFL--EYGS--CMRSLWMSCCKTTLGGCKMIAQRTPSLNVEIINETLEE--YP 162
           R+CPFGD+ L  + G    MRSLWMS C+ T+G CK++A++ P LNVEI NE  +E    
Sbjct: 484 RDCPFGDMALLTDVGKYETMRSLWMSSCEVTVGACKLLAKKMPRLNVEIFNENEQEDCSL 543

Query: 163 DDDTRVDKLYMYQTLDGPRADTPTHIWTL 249
           +D  +V+K+Y+Y+TL G R D P ++WTL
Sbjct: 544 EDGQKVEKMYLYRTLAGKRKDAPEYVWTL 572


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