BLASTX nr result

ID: Atractylodes21_contig00027632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027632
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM64828.1| hypothetical protein [Beta vulgaris]                   69   1e-09
dbj|BAB33151.1| hypothetical protein [Carthamus tinctorius]            61   2e-07
gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]      59   1e-06
ref|XP_003615833.1| FAR1-related protein [Medicago truncatula] g...    58   2e-06
ref|XP_002464927.1| hypothetical protein SORBIDRAFT_01g028975 [S...    56   6e-06

>dbj|BAM64828.1| hypothetical protein [Beta vulgaris]
          Length = 1296

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
 Frame = -1

Query: 332  TPGGTCYWTPDVPVEMKPVVGSIFHSIDDAIAMYRNYAEKAGFDVRLSTLVKGKNDKISW 153
            TP G+  W P  P E+KP VG  F S+ D I  Y+ YA   GF  RL+T  K K+  +  
Sbjct: 1075 TPRGSKEWIPCCPPELKPTVGMPFDSLVDGIEFYKAYARFCGFVERLATEKKDKDGHVYL 1134

Query: 152  RYVLCNRANDGVKKSMDSTDSNS--SCKKRRKSYVKVTGCETCVRFKVMSD 6
            +Y+ CN+   G K+  +S   +   +C   RK  V   GC+  +  +  SD
Sbjct: 1135 KYIYCNK--QGFKEDGESKAKSKPITCSSSRKRSVNRAGCQARIGLRKRSD 1183


>dbj|BAB33151.1| hypothetical protein [Carthamus tinctorius]
          Length = 699

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/83 (37%), Positives = 44/83 (53%)
 Frame = -1

Query: 272 GSIFHSIDDAIAMYRNYAEKAGFDVRLSTLVKGKNDKISWRYVLCNRANDGVKKSMDSTD 93
           G +F +++ A  MYR YA  AGFDVRLS     K      R+ +CN+      K  DS +
Sbjct: 47  GDVFPTVEAAEKMYRKYASAAGFDVRLSNKKTNKFGITIARFFVCNKEGHPTPKLYDSLN 106

Query: 92  SNSSCKKRRKSYVKVTGCETCVR 24
             S  ++RR S +K  GC  C++
Sbjct: 107 KKSGERRRRNSNLKRAGCMACMK 129


>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 800

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
 Frame = -1

Query: 311 WTPDVPVEMKPVVGSIFHSIDDAIAMYRNYAEKAGFDVRLSTLVKGKNDKISWRYVLCNR 132
           W P    E+KPV+G +F ++ +    Y+ YA  AGF VR S   K K D + W+Y LC++
Sbjct: 82  WIPACEDELKPVIGKVFDTLVEGGDFYKAYAYVAGFSVRNSIKTKDK-DGVKWKYFLCSK 140

Query: 131 ANDGVKKSMDSTD---SNSSCKKRRKSYVKVTGCE 36
                +K +D      + +S  K RK  +   GC+
Sbjct: 141 EGFKEEKKVDKPQLLIAENSLSKSRKRKLTREGCK 175


>ref|XP_003615833.1| FAR1-related protein [Medicago truncatula]
           gi|355517168|gb|AES98791.1| FAR1-related protein
           [Medicago truncatula]
          Length = 662

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/96 (33%), Positives = 46/96 (47%)
 Frame = -1

Query: 305 PDVPVEMKPVVGSIFHSIDDAIAMYRNYAEKAGFDVRLSTLVKGKNDKISWRYVLCNRAN 126
           P+   E+KP VG IF ++ +    Y+NYA   GF VR S+    KN    W+Y +C++  
Sbjct: 27  PNYDDELKPKVGQIFDTLAEGKLFYQNYAHNVGFSVRSSSETTDKNGVKRWKYFVCSKEG 86

Query: 125 DGVKKSMDSTDSNSSCKKRRKSYVKVTGCETCVRFK 18
               K  D      + K RR+S  +  GC     FK
Sbjct: 87  YLSDKKKDEVLDAVAVKSRRRSLTR-EGCNANAVFK 121


>ref|XP_002464927.1| hypothetical protein SORBIDRAFT_01g028975 [Sorghum bicolor]
           gi|241918781|gb|EER91925.1| hypothetical protein
           SORBIDRAFT_01g028975 [Sorghum bicolor]
          Length = 471

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 36/93 (38%), Positives = 50/93 (53%)
 Frame = -1

Query: 284 KPVVGSIFHSIDDAIAMYRNYAEKAGFDVRLSTLVKGKNDKISWRYVLCNRANDGVKKSM 105
           KPVVG IF ++ DA   Y++YA  AGF VR+    K  N++I ++  LC+R  +G +K  
Sbjct: 192 KPVVGMIFDTLKDAENFYKSYAHDAGFSVRVGA-HKKNNEEIFYQRYLCSR--EGYRKES 248

Query: 104 DSTDSNSSCKKRRKSYVKVTGCETCVRFKVMSD 6
               S+ S KKR+   V  T C    R  V  D
Sbjct: 249 VQEVSDQSGKKRKTPNVMETRCGCQARIVVKLD 281


Top