BLASTX nr result

ID: Atractylodes21_contig00027484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027484
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    88   5e-15
emb|CBI34941.3| unnamed protein product [Vitis vinifera]               88   5e-15
ref|XP_003571054.1| PREDICTED: methyl-CpG-binding domain-contain...    86   2e-14
ref|XP_002451700.1| hypothetical protein SORBIDRAFT_04g006240 [S...    82   3e-13
ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain...    76   1e-11

>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 77/239 (32%), Positives = 95/239 (39%), Gaps = 67/239 (28%)
 Frame = -3

Query: 518  PLGSVISSTLSSHAVGNLLQVHEFLCRFQEIXXXXXXXXXXXXXXXLICPWPDSFD---- 351
            P G+ + S L    VG+++QV E L RF EI               LICPW D  +    
Sbjct: 679  PPGNPLGSRLPPDLVGDVIQVWESLWRFYEILGLKEPFSIEELEEELICPWSDDLNLLEK 738

Query: 350  -----------TPKE---------------------------VVKETIEKN--------- 312
                       TP                             +  ET +K          
Sbjct: 739  FGTETQENRDITPTRPSGASGHIPSSSTDSGPEVSTGNPHAFIQMETGQKKEAAQAKLAS 798

Query: 311  --CTRSMGDKLTTVHQALLPELVS-------ACLD------EISSDSGNMKDTVNGNMAK 177
               +R  G  LT  H +LL  LVS       A +D      E  S  G  KD  N    K
Sbjct: 799  VTYSRCSGVTLTKAHNSLLKVLVSELQFKVAALVDPNFDSGESKSRRGRKKDADNAIPTK 858

Query: 176  GIKLDMLPINQLTWPEVVRRCILAYLVMGGRLSTLNIAIR-NNKLIRCLLGDGGICCSS 3
              KL+MLPIN+LTWPE+ RR IL  L M G L +  I IR + K+ RCL GDGG+ C S
Sbjct: 859  KTKLNMLPINELTWPELARRYILCVLSMDGNLDSAEITIRESGKVFRCLQGDGGVLCDS 917


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 77/239 (32%), Positives = 95/239 (39%), Gaps = 67/239 (28%)
 Frame = -3

Query: 518  PLGSVISSTLSSHAVGNLLQVHEFLCRFQEIXXXXXXXXXXXXXXXLICPWPDSFD---- 351
            P G+ + S L    VG+++QV E L RF EI               LICPW D  +    
Sbjct: 617  PPGNPLGSRLPPDLVGDVIQVWESLWRFYEILGLKEPFSIEELEEELICPWSDDLNLLEK 676

Query: 350  -----------TPKE---------------------------VVKETIEKN--------- 312
                       TP                             +  ET +K          
Sbjct: 677  FGTETQENRDITPTRPSGASGHIPSSSTDSGPEVSTGNPHAFIQMETGQKKEAAQAKLAS 736

Query: 311  --CTRSMGDKLTTVHQALLPELVS-------ACLD------EISSDSGNMKDTVNGNMAK 177
               +R  G  LT  H +LL  LVS       A +D      E  S  G  KD  N    K
Sbjct: 737  VTYSRCSGVTLTKAHNSLLKVLVSELQFKVAALVDPNFDSGESKSRRGRKKDADNAIPTK 796

Query: 176  GIKLDMLPINQLTWPEVVRRCILAYLVMGGRLSTLNIAIR-NNKLIRCLLGDGGICCSS 3
              KL+MLPIN+LTWPE+ RR IL  L M G L +  I IR + K+ RCL GDGG+ C S
Sbjct: 797  KTKLNMLPINELTWPELARRYILCVLSMDGNLDSAEITIRESGKVFRCLQGDGGVLCDS 855


>ref|XP_003571054.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Brachypodium distachyon]
          Length = 464

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 60/185 (32%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
 Frame = -3

Query: 527 QSFPLGSVISSTLSSHAVGNLLQVHEFLCRFQEIXXXXXXXXXXXXXXXLICPWPDSFDT 348
           +  P G +IS  LS    G++ Q+ EFL RF EI               LI PWP     
Sbjct: 25  RELPPGHLISCKLSPELAGDVFQIWEFLGRFAEIIGLKEVPSYEQLEDELIDPWPICEAD 84

Query: 347 PKEVVKETIEKNCTRSMGDKLTTVHQALLPELVSACL---------DEISSDSGNMKDTV 195
             ++  +T+ +     +     T+ + L  EL+S             E     G  +DT 
Sbjct: 85  QDKLAAQTLGRYSGVVLPGVHLTLFKVLFGELLSKVAIFVDPNIDPKESKPRRGRKRDTE 144

Query: 194 NGNMAKGIKLDMLPINQLTWPEVVRRCILAYLVMGGRLSTLNIAIRNN-KLIRCLLGDGG 18
           + N AK +  DML  N+LTWPE+ RR +LA   + G +   +I+ R   KL RCL GDGG
Sbjct: 145 SLNSAKELNFDMLTANKLTWPELARRYLLAVSSISGCMDLSDISSREGVKLFRCLQGDGG 204

Query: 17  ICCSS 3
           I C +
Sbjct: 205 ILCGA 209


>ref|XP_002451700.1| hypothetical protein SORBIDRAFT_04g006240 [Sorghum bicolor]
            gi|241931531|gb|EES04676.1| hypothetical protein
            SORBIDRAFT_04g006240 [Sorghum bicolor]
          Length = 1872

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 81/271 (29%), Positives = 113/271 (41%), Gaps = 43/271 (15%)
 Frame = -3

Query: 686  SSITCCLTSETILFSISSAQLHSDIIMMARDIDVQLPVQFESMLISEETAMKKQSFPLGS 507
            SS+T  + S T++    ++  H D++   R   V    Q  +    + ++   +  P G+
Sbjct: 454  SSLT--IASGTLIAVNKNSPSHGDVMSYGRHGSVVSGPQDHA----QPSSFSIRELPPGN 507

Query: 506  VISSTLSSHAVGNLLQVHEFLCRFQEIXXXXXXXXXXXXXXXLICPWPDSFD-------- 351
             IS  L     G++LQ+ EFL RF EI               LI PWP   +        
Sbjct: 508  PISCKLPPELAGDVLQILEFLGRFAEIIGLKELPSIEQVEDELIDPWPIHVNENGTQNYR 567

Query: 350  --TPK--------------EVVKETIEKNCT-----RSMGDKLTTVHQALLP----ELVS 246
              TP               E  +E  +         R  G  L  +H ALL     ELVS
Sbjct: 568  DHTPPMNSPANVSTSYSNGESAREAAQNKLAAQTLGRCSGLVLPEIHLALLKVLFTELVS 627

Query: 245  AC---------LDEISSDSGNMKDTVNGNMAKGIKLDMLPINQLTWPEVVRRCILAYLVM 93
                       L E  S  G  +DT    +A+ +K+DML  N LTWPE+ RR ILA   M
Sbjct: 628  RVAIFVDPKFDLKESKSRRGRKRDT--DTLARELKIDMLTANNLTWPELARRYILAVSSM 685

Query: 92   GGRLSTLNIAIRNN-KLIRCLLGDGGICCSS 3
             G +   +I+ R   KL RCL GDGG+ C +
Sbjct: 686  SGCMDLSDISSREGVKLFRCLQGDGGVLCGA 716


>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2060

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 67/216 (31%), Positives = 90/216 (41%), Gaps = 35/216 (16%)
 Frame = -3

Query: 545  ETAMKKQSFPLGSVISSTLSSHAVGNLLQVHEFLCRFQEIXXXXXXXXXXXXXXXLI--- 375
            E+ + +   P G  +S TL +  +G++LQ+ E L RF E+               L+   
Sbjct: 526  ESPVIRDCCPPGKPLSLTLPADLIGDVLQIWESLWRFSEVLGLEEPISFEELEEELLDCN 585

Query: 374  ---CPWPDSFDTPKEV----VKETIEK-----------NCTRSMGDKLTTVHQALLPELV 249
               C    S  + K        ET  K           N  R +G  LT  H ALL  LV
Sbjct: 586  LSLCSASASGVSGKNAQALNTMETESKREASQARLASHNYGRFIGVALTKAHSALLKVLV 645

Query: 248  SACLDEIS-------------SDSGNMKDTVNGNMAKGIKLDMLPINQLTWPEVVRRCIL 108
               L +++             S  G  KD  N    K +K+D LPIN+LTWPE+ RR IL
Sbjct: 646  GELLSKVAAFADPNFDAGESKSRRGRKKDADNLIPVKKMKVDKLPINELTWPELARRYIL 705

Query: 107  AYLVMGGRLSTLNIAIRNN-KLIRCLLGDGGICCSS 3
                + G+     I  R   K+ RCL GDGG  C S
Sbjct: 706  TISSLEGKFDCAEINSREGWKVFRCLQGDGGTLCGS 741


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