BLASTX nr result

ID: Atractylodes21_contig00027445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027445
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   159   1e-36
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   155   1e-35
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   148   2e-33
emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]   147   4e-33
gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]            147   4e-33

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  159 bits (402), Expect = 1e-36
 Identities = 88/267 (32%), Positives = 142/267 (53%), Gaps = 27/267 (10%)
 Frame = +2

Query: 5   KKPAEDDPTYDDWEICNSIVITWILNAVTKEISEGLIYYTSASAIWKQLHHMYEQSNLVV 184
           KKP ++D  ++ W  C+ +V+ W+LN+++KEI+E ++Y  +A  +W++L   Y Q +   
Sbjct: 84  KKPDKEDLLFEQWRRCSDMVLAWLLNSLSKEIAESVLYSQTAQELWQELEQRYGQIDGTK 143

Query: 185 VFQLQKELNQIAQGSDLVTTYYSRFERIWDEFVYVDDMP----DCSCTARESWMKRMEKQ 352
           +FQLQ+ELN ++QG++ V  Y+++ +RIWD+   ++       +C+C A+    K  E Q
Sbjct: 144 MFQLQRELNNVSQGTNDVAAYFNKLKRIWDQMKVLNTFMVCSCECNCEAKGHNAKMQEDQ 203

Query: 353 QLVQFLFGLNDNYLQIRSSILHEKPTHSIVDAYATLIQEEQQREMVAPTRMNTEDVAIVA 532
           QL+QFL GLN+ Y  IR +IL  KP  S   AY+ +  EE QR + A   ++T+  A  A
Sbjct: 204 QLIQFLMGLNEVYSGIRGNILMMKPLPSTAQAYSIISHEETQRGIAAGNNVSTDSAAFNA 263

Query: 533 NMANLSSQKVFMSAETR------------------KNIVYNYCKKKGHVKSECYRLHGFP 658
           +  N ++Q+       R                   N    YC+  GHV+ EC +L+G  
Sbjct: 264 STQNWNNQRNNYDNRARNQNYNNRRNNYEGRRSNQNNSYCTYCRTSGHVREECRKLNG-- 321

Query: 659 ENFKFNNPKRSISTAN-----AVEGNT 724
              + N  +R     N     A EGNT
Sbjct: 322 ---RDNRNRRPAGNPNTQANAAYEGNT 345


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  155 bits (393), Expect = 1e-35
 Identities = 79/254 (31%), Positives = 143/254 (56%), Gaps = 3/254 (1%)
 Frame = +2

Query: 11  PAEDDPTYDDWEICNSIVITWILNAVTKEISEGLIYYTSASAIWKQLHHMYEQSNLVVVF 190
           P  DD  +  W  CNS+VI+WILN+V K+I++ L+Y+ +A  IW  L   + QSN   +F
Sbjct: 77  PESDDLLFGTWIRCNSMVISWILNSVHKDIADSLLYFDTAVGIWNDLRDRFCQSNGPRIF 136

Query: 191 QLQKELNQIAQGSDLVTTYYSRFERIWDEFVYVDDMPDCSCTARESWMKRMEKQQLVQFL 370
           Q++K L  ++QGS  V+TYY+R + +WDE      +P+C+C   ++WM+  +++ ++QFL
Sbjct: 137 QIKKHLIALSQGSLDVSTYYTRLKILWDELKGFQPLPECACGTMKTWMEFQQQEYVMQFL 196

Query: 371 FGLNDNYLQIRSSILHEKPTHSIVDAYATLIQEEQQREMVAPTRMNTEDVAIVANMANLS 550
            GLN++++Q RS IL  +P   I   ++ + Q+E+Q  +        + VA   + + ++
Sbjct: 197 MGLNESFVQTRSQILMMEPLPPIAKVFSLVAQDERQCSINYGLYTPPDSVAANDSNSTVA 256

Query: 551 SQKVFMSAETRKN-IVYNYCKKKGHVKSECYRLHGFPENFKF--NNPKRSISTANAVEGN 721
                ++++ +K+    ++C   GH   +CY+L+G+P  +KF   NP             
Sbjct: 257 ISAARLNSKPKKDRPTCSHCGILGHTVDKCYKLYGYPPGYKFKSKNPHAKAQANQTSSRT 316

Query: 722 TEIMSSDYHQIIKL 763
           TE  ++    ++ L
Sbjct: 317 TEASATADSPLVSL 330


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  148 bits (373), Expect = 2e-33
 Identities = 89/279 (31%), Positives = 158/279 (56%), Gaps = 6/279 (2%)
 Frame = +2

Query: 8   KPAEDDPTYDDWEICNSIVITWILNAVTKEISEGLIYYTSASAIWKQLHHMYEQSNLVVV 187
           KP +DDP    W  CNS+V +W+LN+V+KEI   ++Y+ +A+AIWK L+  + +S+L  +
Sbjct: 20  KPDDDDPYCKIWRRCNSMVKSWLLNSVSKEIYTSILYFPTAAAIWKDLYTRFHKSSLPRL 79

Query: 188 FQLQKELNQIAQGSDLVTTYYSRFERIWDEFVYVDDMPDCSCTARESWMKRMEKQQLVQF 367
           ++L+++++ + QG+  +++Y++R + +W+E   +  +P       E  +   E  +++ F
Sbjct: 80  YKLRQQIHSLRQGNLDLSSYHTRTQTLWEELTSLQAVP----RTVEDLLIERETNRVIDF 135

Query: 368 LFGLNDNYLQIRSSILHEKPTHSIVDAYATLIQEEQQRE-MVAPTRMNTEDVAIVANMAN 544
           L GLND Y  +RS IL +K   S+ + +  + Q+E QR   ++ T   T  V  V+N ++
Sbjct: 136 LMGLNDCYDTVRSQILMKKTLPSLSEVFNMIDQDETQRSARISTTPGMTSSVFPVSNQSS 195

Query: 545 LSSQKVFMSAET---RKNIVYNYCKKKGHVKSECYRLHGFPENFKFNNP--KRSISTANA 709
            S+    ++ +T   ++  V +YC + GHV+  CY+ HG+P +FK      K SIS ANA
Sbjct: 196 QSA----LNGDTYQKKERPVCSYCSRPGHVEDTCYKKHGYPTSFKSKQKFVKPSIS-ANA 250

Query: 710 VEGNTEIMSSDYHQIIKLLNNCKISDTTTTSGQSIQNVA 826
             G+ E+           +NN  +S    T+ Q  Q V+
Sbjct: 251 AIGSEEV-----------VNNTSVSTGDLTTSQIQQLVS 278


>emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]
          Length = 332

 Score =  147 bits (371), Expect = 4e-33
 Identities = 81/259 (31%), Positives = 146/259 (56%), Gaps = 9/259 (3%)
 Frame = +2

Query: 2   TKKPAEDDPT-YDDWEICNSIVITWILNAVTKEISEGLIYYTSASAIWKQLHHMYEQSNL 178
           T   A D P  +  W+ CN ++++WILN++++++++ +I+ T+A  +W+ L   + QSN 
Sbjct: 65  TMSSATDKPDEHASWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQSNA 124

Query: 179 VVVFQLQKELNQIAQGSDLVTTYYSRFERIWDEFVYVDDMPDCSCTARESWMKRMEKQQL 358
             +FQ+++++  + Q    V  YY+R +++WDE    +D   CSC A        ++++L
Sbjct: 125 PRIFQIERDIACLTQDQMTVAAYYTRLKKLWDELGSYNDTV-CSCGADH------KRRRL 177

Query: 359 VQFLFGLNDNYLQIRSSILHEKPTHSIVDAYATLIQEEQQREMVAPTRMNTEDVAIVANM 538
           +QFL GLN++Y  IR  IL   P   +  AY++++QEE+QR + A TR  TE+ A+V   
Sbjct: 178 MQFLMGLNESYNAIRGQILLMNPLPDVARAYSSIVQEEKQRSLGA-TRETTENSAMVVQR 236

Query: 539 ANLSSQKV--------FMSAETRKNIVYNYCKKKGHVKSECYRLHGFPENFKFNNPKRSI 694
           A   +  V          +   RK +  +YC +  HV+  C++L+G+P      +PK ++
Sbjct: 237 AEPMALAVRHGQGSSSRSNPSNRKPLHCSYCDRDHHVRETCWKLNGYPP----EHPKHAL 292

Query: 695 STANAVEGNTEIMSSDYHQ 751
           + +N   GNT    ++ HQ
Sbjct: 293 NRSN--HGNTHFKRNNSHQ 309


>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score =  147 bits (371), Expect = 4e-33
 Identities = 66/216 (30%), Positives = 127/216 (58%)
 Frame = +2

Query: 23  DPTYDDWEICNSIVITWILNAVTKEISEGLIYYTSASAIWKQLHHMYEQSNLVVVFQLQK 202
           D  ++ WE CN+IV++W++N V++E+  G++Y T++ ++W  L   +++ N V ++QL +
Sbjct: 66  DELHEQWETCNAIVLSWLMNTVSEELLSGIVYATNSCSVWNDLKERFDKVNRVRIYQLHR 125

Query: 203 ELNQIAQGSDLVTTYYSRFERIWDEFVYVDDMPDCSCTARESWMKRMEKQQLVQFLFGLN 382
           ++  ++QG+D V+ Y+S+ + +W+E+  +   P  +C+  + +   +E+ +L+QFL GLN
Sbjct: 126 DITTLSQGTDSVSHYFSKLKTLWNEYDVIVPSPCSTCSQSKEYNDHLEQMRLIQFLSGLN 185

Query: 383 DNYLQIRSSILHEKPTHSIVDAYATLIQEEQQREMVAPTRMNTEDVAIVANMANLSSQKV 562
           ++Y Q R  IL +  T S+  AYA +I++E Q        +      +++   N  ++K 
Sbjct: 186 ESYDQARRQILLKGTTPSMNQAYAMIIEDEIQHSSCMDNAVEKPSSMVMSVNRNQGAEK- 244

Query: 563 FMSAETRKNIVYNYCKKKGHVKSECYRLHGFPENFK 670
               E  K    +YC   GH K  CY+L G+P ++K
Sbjct: 245 ----EHYKGKKCDYCHFLGHTKDNCYKLIGYPSDWK 276


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