BLASTX nr result

ID: Atractylodes21_contig00027416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027416
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460991.1| hypothetical protein SORBIDRAFT_02g038800 [S...    60   5e-07

>ref|XP_002460991.1| hypothetical protein SORBIDRAFT_02g038800 [Sorghum bicolor]
           gi|241924368|gb|EER97512.1| hypothetical protein
           SORBIDRAFT_02g038800 [Sorghum bicolor]
          Length = 157

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 40/134 (29%), Positives = 55/134 (41%), Gaps = 1/134 (0%)
 Frame = +3

Query: 177 QVITAINNFFQHIIGFFNQEFPPETREEQIQQWLNVAAPYXXXXXXXXXXXXXXXXXXXX 356
           +V+  +   F  +    ++ FPPETR E ++QW++VA                       
Sbjct: 48  EVVAYLATLFAALAEKADEVFPPETRSETLRQWVHVAVTVVVPAVLG------------- 94

Query: 357 XYAILVRCFNIVCWFFLCLGXXXXXXXXXXXXXXXXXXXXXMMKAPGRPSMRLPRASFEA 536
             A+++RC    CW   C G                      M APGR   R+PR  FE 
Sbjct: 95  --ALVLRCVARCCWRCCCAGGGRAARGGR------------FMAAPGRGGARMPRGVFEN 140

Query: 537 NPRGYFRGLR-GQP 575
           NPR YFR LR G+P
Sbjct: 141 NPRDYFRDLRAGKP 154


Top