BLASTX nr result

ID: Atractylodes21_contig00027336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027336
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40924.3| unnamed protein product [Vitis vinifera]              154   9e-36
ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cuc...   140   1e-31
ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213...   140   1e-31
ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   139   2e-31

>emb|CBI40924.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score =  154 bits (388), Expect = 9e-36
 Identities = 79/139 (56%), Positives = 106/139 (76%), Gaps = 6/139 (4%)
 Frame = -1

Query: 402  LRCSMAKDATQLKNEQMHVQDSE-----SIDQVKEEMTAKLQKDMSLDFQKKVILSKHEM 238
            LRC+MAKD   +KNE++ V +       S+D  KE++   + KD+S+DFQKK+ L KHE 
Sbjct: 944  LRCAMAKDMVTIKNERLCVDEDSNCTEISVDTNKEKLLTLMPKDISVDFQKKITLGKHEK 1003

Query: 237  QDSHSRS-LNSKDTYNSLLDVEKEDQLLDQSLRARSVAMEKLKAGRQQIILVASLLDRVP 61
            QD+ SRS L+S +T   LL++EKEDQLLDQ L++RSVAME++++ +Q  ILVASL+DR+P
Sbjct: 1004 QDTSSRSFLDSNETCKPLLEIEKEDQLLDQLLQSRSVAMERIRSSQQHFILVASLIDRIP 1063

Query: 60   NLAGLARTCEVFKAASLVV 4
            NLAGLARTCEVFKAA L +
Sbjct: 1064 NLAGLARTCEVFKAAGLAI 1082


>ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  140 bits (352), Expect = 1e-31
 Identities = 77/139 (55%), Positives = 97/139 (69%), Gaps = 6/139 (4%)
 Frame = -1

Query: 402  LRCSMAKDATQLKNEQMHVQDSESI-----DQVKEEMTAKLQKDMSLDFQKKVILSKHEM 238
            LRCSMA D T +KNE     +  ++     D  +E  T+KL    SLDFQKKV LSKHE 
Sbjct: 1575 LRCSMANDLTAIKNESFKTNEGHNLIGISSDINEENSTSKLPVATSLDFQKKVTLSKHEK 1634

Query: 237  QDSHSRS-LNSKDTYNSLLDVEKEDQLLDQSLRARSVAMEKLKAGRQQIILVASLLDRVP 61
            +D+ + S L SK+ Y  L ++E EDQLL+Q L +RS++ME L+  RQ IILVASLLDR+P
Sbjct: 1635 KDTETSSYLGSKEAYKFLHELEGEDQLLNQLLHSRSLSMENLRTNRQDIILVASLLDRIP 1694

Query: 60   NLAGLARTCEVFKAASLVV 4
            NLAGLARTCEVFKA+ L +
Sbjct: 1695 NLAGLARTCEVFKASGLAI 1713


>ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  140 bits (352), Expect = 1e-31
 Identities = 77/139 (55%), Positives = 97/139 (69%), Gaps = 6/139 (4%)
 Frame = -1

Query: 402  LRCSMAKDATQLKNEQMHVQDSESI-----DQVKEEMTAKLQKDMSLDFQKKVILSKHEM 238
            LRCSMA D T +KNE     +  ++     D  +E  T+KL    SLDFQKKV LSKHE 
Sbjct: 1575 LRCSMANDLTAIKNESFKTNEGHNLIGISSDINEENSTSKLPVATSLDFQKKVTLSKHEK 1634

Query: 237  QDSHSRS-LNSKDTYNSLLDVEKEDQLLDQSLRARSVAMEKLKAGRQQIILVASLLDRVP 61
            +D+ + S L SK+ Y  L ++E EDQLL+Q L +RS++ME L+  RQ IILVASLLDR+P
Sbjct: 1635 KDTETSSYLGSKEAYKFLHELEGEDQLLNQLLHSRSLSMENLRTNRQDIILVASLLDRIP 1694

Query: 60   NLAGLARTCEVFKAASLVV 4
            NLAGLARTCEVFKA+ L +
Sbjct: 1695 NLAGLARTCEVFKASGLAI 1713


>ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1|
            predicted protein [Populus trichocarpa]
          Length = 1224

 Score =  140 bits (352), Expect = 1e-31
 Identities = 73/134 (54%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
 Frame = -1

Query: 402  LRCSMAKDATQLKNEQMHVQDSESIDQVKEEMTAKLQKDMSLDFQKKVILSKHEMQDSHS 223
            LRCSMAKD   +KNE +   +  +  +    + ++L K+ S DFQKK+ LSKHE QD+ S
Sbjct: 972  LRCSMAKDVVTIKNESLKTDEDGNCRRTV--IDSQLPKETSFDFQKKLTLSKHEKQDTDS 1029

Query: 222  RS-LNSKDTYNSLLDVEKEDQLLDQSLRARSVAMEKLKAGRQQIILVASLLDRVPNLAGL 46
             S L + +    LL++EKED+LLDQSL++R + MEK++A RQQ ILVASLLDR+PNLAGL
Sbjct: 1030 SSVLGNNEACKQLLEMEKEDELLDQSLQSRRLTMEKIRASRQQFILVASLLDRIPNLAGL 1089

Query: 45   ARTCEVFKAASLVV 4
            ARTCEVFK + L +
Sbjct: 1090 ARTCEVFKVSGLAI 1103


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
            gi|223536320|gb|EEF37970.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1744

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/133 (51%), Positives = 97/133 (72%)
 Frame = -1

Query: 402  LRCSMAKDATQLKNEQMHVQDSESIDQVKEEMTAKLQKDMSLDFQKKVILSKHEMQDSHS 223
            LRCSMAKD   +KNE   + ++ +    +  +  +L ++ SLDFQKK+  SKHE +D+ S
Sbjct: 1494 LRCSMAKDVITIKNESFKIDENPTC---RRTLPKELLEEASLDFQKKITPSKHEKKDADS 1550

Query: 222  RSLNSKDTYNSLLDVEKEDQLLDQSLRARSVAMEKLKAGRQQIILVASLLDRVPNLAGLA 43
             S+   + Y  LL++EKED+LLDQSL++R + ME+++A RQ +ILVAS LDRVPNLAGLA
Sbjct: 1551 SSILGSNAYKQLLEMEKEDELLDQSLQSRILTMERIRASRQHLILVASFLDRVPNLAGLA 1610

Query: 42   RTCEVFKAASLVV 4
            RTCEVF+A+ L +
Sbjct: 1611 RTCEVFRASGLAI 1623


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