BLASTX nr result

ID: Atractylodes21_contig00027327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027327
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26741.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002276224.1| PREDICTED: uncharacterized protein LOC100260...    60   2e-07
ref|XP_002529053.1| conserved hypothetical protein [Ricinus comm...    57   1e-06
ref|XP_003617710.1| mTERF domain-containing protein [Medicago tr...    56   3e-06
ref|XP_004151387.1| PREDICTED: uncharacterized protein LOC101207...    55   5e-06

>emb|CBI26741.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 12/81 (14%)
 Frame = +3

Query: 21  MAISSLYPSISLLHSLFPNPSYLQDGLNS------------TTRRTSGRFAVSSSHSNPK 164
           MA   LY    + HS  P+ S   D L++            ++ RTSG F V S+HSNP+
Sbjct: 1   MAAFYLYTFNLIPHSHSPSASSNPDSLSNLNSISAKIDKRRSSCRTSG-FTVLSTHSNPR 59

Query: 165 ILKSNRRSRFGQRLSPYDSDN 227
           ILKSNRRSR+GQ LSPYD+D+
Sbjct: 60  ILKSNRRSRYGQVLSPYDTDD 80


>ref|XP_002276224.1| PREDICTED: uncharacterized protein LOC100260706 [Vitis vinifera]
          Length = 514

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 12/81 (14%)
 Frame = +3

Query: 21  MAISSLYPSISLLHSLFPNPSYLQDGLNS------------TTRRTSGRFAVSSSHSNPK 164
           MA   LY    + HS  P+ S   D L++            ++ RTSG F V S+HSNP+
Sbjct: 1   MAAFYLYTFNLIPHSHSPSASSNPDSLSNLNSISAKIDKRRSSCRTSG-FTVLSTHSNPR 59

Query: 165 ILKSNRRSRFGQRLSPYDSDN 227
           ILKSNRRSR+GQ LSPYD+D+
Sbjct: 60  ILKSNRRSRYGQVLSPYDTDD 80


>ref|XP_002529053.1| conserved hypothetical protein [Ricinus communis]
           gi|223531533|gb|EEF33364.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 508

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 14/86 (16%)
 Frame = +3

Query: 21  MAISSLYPSIS---------LLHSLFPNPS-----YLQDGLNSTTRRTSGRFAVSSSHSN 158
           MA+S +YP  +          LHS+          Y++D     +R  S +  V S+HSN
Sbjct: 1   MAVSCMYPFNNPTLPSQPHLFLHSVSSESKMREFYYIEDRRRRRSR-VSSKLVVLSTHSN 59

Query: 159 PKILKSNRRSRFGQRLSPYDSDNENE 236
            KILKSNR+SRFGQ LSPY SD++ E
Sbjct: 60  AKILKSNRKSRFGQTLSPYASDDDEE 85


>ref|XP_003617710.1| mTERF domain-containing protein [Medicago truncatula]
           gi|355519045|gb|AET00669.1| mTERF domain-containing
           protein [Medicago truncatula]
          Length = 528

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
 Frame = +3

Query: 33  SLYPSISLLHSLFPNPSYLQDGLNSTTRRTSGR--FAVSSSHSNPKILKSNRRSRFGQRL 206
           SLYP        FP+ ++     +S++     R  F V S+HSNPKILK+NR+S +G+ L
Sbjct: 7   SLYPYNPFNILPFPSSNHASASCSSSSSSFLKRRKFTVLSAHSNPKILKTNRKSTYGKFL 66

Query: 207 SPYDSDNENE 236
           SPYDSD+E E
Sbjct: 67  SPYDSDDEIE 76


>ref|XP_004151387.1| PREDICTED: uncharacterized protein LOC101207692 [Cucumis sativus]
           gi|449517569|ref|XP_004165818.1| PREDICTED:
           uncharacterized protein LOC101227066 [Cucumis sativus]
          Length = 521

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/79 (45%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
 Frame = +3

Query: 21  MAISSLYPSISLLHSLFPNPS--YLQDGLNSTT-------RRTSGRFAVSSSHSNPKILK 173
           MA  SL+     LHS FP+ S  YL      T+       RR   RF V S+HS+  ILK
Sbjct: 1   MASLSLFSFSPTLHSHFPSSSDFYLPSQFLLTSSFGSRSRRRNVPRFVVRSTHSSAAILK 60

Query: 174 SNRRSRFGQRLSPYDSDNE 230
             RRSRFG+ LSP+DSD +
Sbjct: 61  PKRRSRFGRTLSPFDSDED 79


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