BLASTX nr result

ID: Atractylodes21_contig00027307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027307
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333576.1| predicted protein [Populus trichocarpa] gi|2...   227   9e-58
ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat...   224   4e-57
ref|XP_002330643.1| predicted protein [Populus trichocarpa] gi|2...   223   2e-56
ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat...   220   8e-56
emb|CBI28441.3| unnamed protein product [Vitis vinifera]              220   8e-56

>ref|XP_002333576.1| predicted protein [Populus trichocarpa] gi|222837227|gb|EEE75606.1|
           predicted protein [Populus trichocarpa]
          Length = 781

 Score =  227 bits (578), Expect = 9e-58
 Identities = 100/136 (73%), Positives = 122/136 (89%)
 Frame = -3

Query: 410 FFTSMPIKNVYSWNSMISGYARHGHGDKSLEIFTKMKLEGQLPDHVTFVSVLSACSHIGL 231
           FF  MP++N+YSWNSMISGYARHGHGD +L +FT+MKL GQLPDH+TFV VLSACSHIGL
Sbjct: 465 FFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGL 524

Query: 230 VDQGFEHFNSMSKVYGLKPKMEHFSCMVDILGRAGELDKMEDFLNKMPMNPGVLTWRTVL 51
           VD+GFE+F SM++VYGL P++EH+SCMVD+LGRAGELDK+E+F+NKMP+ P +L WRTVL
Sbjct: 525 VDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVL 584

Query: 50  GACCRANGQQTTNLGR 3
           GACCR NG++ T LGR
Sbjct: 585 GACCRGNGRK-TELGR 599



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/114 (30%), Positives = 60/114 (52%)
 Frame = -3

Query: 377 SWNSMISGYARHGHGDKSLEIFTKMKLEGQLPDHVTFVSVLSACSHIGLVDQGFEHFNSM 198
           SWNSMISGY  +    K++++   M   GQ  D  TF +VLSAC+ +  ++ G E  ++ 
Sbjct: 375 SWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGME-VHAC 433

Query: 197 SKVYGLKPKMEHFSCMVDILGRAGELDKMEDFLNKMPMNPGVLTWRTVLGACCR 36
           +    L+  +   S +VD+  + G +D    F N MP+   + +W +++    R
Sbjct: 434 AIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISGYAR 486


>ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
            gi|449506934|ref|XP_004162888.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  224 bits (572), Expect = 4e-57
 Identities = 102/136 (75%), Positives = 119/136 (87%)
 Frame = -3

Query: 410  FFTSMPIKNVYSWNSMISGYARHGHGDKSLEIFTKMKLEGQLPDHVTFVSVLSACSHIGL 231
            FF  MP +N+YSWNSMISGYARHGHG KSL++F +MKL+G LPDHVTFV VLSACSH GL
Sbjct: 751  FFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGL 810

Query: 230  VDQGFEHFNSMSKVYGLKPKMEHFSCMVDILGRAGELDKMEDFLNKMPMNPGVLTWRTVL 51
            V++GF HF+SMS++YGL P+MEHFSCMVD+LGR GEL+KMEDFLN+MP+ P VL WRTVL
Sbjct: 811  VNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVL 870

Query: 50   GACCRANGQQTTNLGR 3
            GACCRANG+ T  LGR
Sbjct: 871  GACCRANGRNTA-LGR 885



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/123 (30%), Positives = 64/123 (52%)
 Frame = -3

Query: 377  SWNSMISGYARHGHGDKSLEIFTKMKLEGQLPDHVTFVSVLSACSHIGLVDQGFEHFNSM 198
            SWNSMISGY  +    K++++   M  +GQ  D  TF +VLSAC+ +  +++G E  +  
Sbjct: 661  SWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGME-VHGC 719

Query: 197  SKVYGLKPKMEHFSCMVDILGRAGELDKMEDFLNKMPMNPGVLTWRTVLGACCRANGQQT 18
            S    L+  +   S +VD+  + G +D    F   MP    + +W +++    R +G  T
Sbjct: 720  SVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR-NLYSWNSMISGYAR-HGHGT 777

Query: 17   TNL 9
             +L
Sbjct: 778  KSL 780



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/58 (41%), Positives = 38/58 (65%)
 Frame = -3

Query: 407 FTSMPIKNVYSWNSMISGYARHGHGDKSLEIFTKMKLEGQLPDHVTFVSVLSACSHIG 234
           F  MP++N+ SW+ +ISGY R+   +++ E+F KM  +G +P+H  F SV+ AC   G
Sbjct: 131 FDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG 188


>ref|XP_002330643.1| predicted protein [Populus trichocarpa] gi|222872247|gb|EEF09378.1|
            predicted protein [Populus trichocarpa]
          Length = 777

 Score =  223 bits (567), Expect = 2e-56
 Identities = 98/136 (72%), Positives = 122/136 (89%)
 Frame = -3

Query: 410  FFTSMPIKNVYSWNSMISGYARHGHGDKSLEIFTKMKLEGQLPDHVTFVSVLSACSHIGL 231
            FF  MP++N+YSWNSMISGYARHG+GD +L +FT+MKL GQLPDH+TFV VLSACSHIGL
Sbjct: 618  FFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGL 677

Query: 230  VDQGFEHFNSMSKVYGLKPKMEHFSCMVDILGRAGELDKMEDFLNKMPMNPGVLTWRTVL 51
            VD+GFE+F SM++VYGL P++EH+SCMVD+LGRAGELDK+++F+NKMP+ P +L WRTVL
Sbjct: 678  VDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIDNFINKMPIKPNILIWRTVL 737

Query: 50   GACCRANGQQTTNLGR 3
            GACCR NG++ T LGR
Sbjct: 738  GACCRGNGRK-TELGR 752



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/114 (31%), Positives = 61/114 (53%)
 Frame = -3

Query: 377 SWNSMISGYARHGHGDKSLEIFTKMKLEGQLPDHVTFVSVLSACSHIGLVDQGFEHFNSM 198
           SWNSMISGY  +    K++++   M   GQ  D  TF +VLSAC+ +  +++G E  ++ 
Sbjct: 528 SWNSMISGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGME-VHAC 586

Query: 197 SKVYGLKPKMEHFSCMVDILGRAGELDKMEDFLNKMPMNPGVLTWRTVLGACCR 36
           +    L+  +   S +VD+  + G +D    F N MPM   + +W +++    R
Sbjct: 587 AIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPMR-NLYSWNSMISGYAR 639


>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  220 bits (561), Expect = 8e-56
 Identities = 99/136 (72%), Positives = 119/136 (87%)
 Frame = -3

Query: 410  FFTSMPIKNVYSWNSMISGYARHGHGDKSLEIFTKMKLEGQLPDHVTFVSVLSACSHIGL 231
            FF  MP++NVYSWNSMISGYARHGHG+K+L++FT+M L+GQ PDHVTFV VLSACSH+G 
Sbjct: 749  FFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGF 808

Query: 230  VDQGFEHFNSMSKVYGLKPKMEHFSCMVDILGRAGELDKMEDFLNKMPMNPGVLTWRTVL 51
            V++GFEHF SMS+VY L P++EHFSCMVD+LGRAG+LD++ DF+N MPM P VL WRTVL
Sbjct: 809  VEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 868

Query: 50   GACCRANGQQTTNLGR 3
            GACCRANG + T LGR
Sbjct: 869  GACCRANG-RNTELGR 883



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
 Frame = -3

Query: 377  SWNSMISGYARHGHGDKSLEIFTKMKLEGQLPDHVTFVSVLSACSHIGLVDQGFEHFNSM 198
            SWNSMISGY  +    K++++   M  +GQ  D  TF ++LSAC+ +  +++G E  ++ 
Sbjct: 659  SWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGME-VHAC 717

Query: 197  SKVYGLKPKMEHFSCMVDILGRAGELDKMEDFLNKMPMNPGVLTWRTVLGACCR-ANGQQ 21
                 L+  +   S +VD+  + G +D    F   MP+   V +W +++    R  +G++
Sbjct: 718  GIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGEK 776

Query: 20   TTNL 9
               L
Sbjct: 777  ALKL 780


>emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  220 bits (561), Expect = 8e-56
 Identities = 99/136 (72%), Positives = 119/136 (87%)
 Frame = -3

Query: 410  FFTSMPIKNVYSWNSMISGYARHGHGDKSLEIFTKMKLEGQLPDHVTFVSVLSACSHIGL 231
            FF  MP++NVYSWNSMISGYARHGHG+K+L++FT+M L+GQ PDHVTFV VLSACSH+G 
Sbjct: 597  FFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGF 656

Query: 230  VDQGFEHFNSMSKVYGLKPKMEHFSCMVDILGRAGELDKMEDFLNKMPMNPGVLTWRTVL 51
            V++GFEHF SMS+VY L P++EHFSCMVD+LGRAG+LD++ DF+N MPM P VL WRTVL
Sbjct: 657  VEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 716

Query: 50   GACCRANGQQTTNLGR 3
            GACCRANG + T LGR
Sbjct: 717  GACCRANG-RNTELGR 731



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
 Frame = -3

Query: 377 SWNSMISGYARHGHGDKSLEIFTKMKLEGQLPDHVTFVSVLSACSHIGLVDQGFEHFNSM 198
           SWNSMISGY  +    K++++   M  +GQ  D  TF ++LSAC+ +  +++G E  ++ 
Sbjct: 507 SWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGME-VHAC 565

Query: 197 SKVYGLKPKMEHFSCMVDILGRAGELDKMEDFLNKMPMNPGVLTWRTVLGACCR-ANGQQ 21
                L+  +   S +VD+  + G +D    F   MP+   V +W +++    R  +G++
Sbjct: 566 GIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGEK 624

Query: 20  TTNL 9
              L
Sbjct: 625 ALKL 628


Top