BLASTX nr result

ID: Atractylodes21_contig00027305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027305
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation...   131   6e-29
emb|CAN80292.1| hypothetical protein VITISV_032012 [Vitis vinifera]   131   6e-29
ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation...   130   8e-29
ref|XP_002526864.1| eukaryotic translation initiation factor 3f,...   130   1e-28
ref|XP_002315172.1| predicted protein [Populus trichocarpa] gi|1...   124   6e-27

>ref|XP_002279347.1| PREDICTED: eukaryotic translation initiation factor 3 subunit F
           [Vitis vinifera] gi|296086088|emb|CBI31529.3| unnamed
           protein product [Vitis vinifera]
          Length = 285

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/73 (86%), Positives = 67/73 (91%)
 Frame = +3

Query: 114 MASTDQTVLQFVPLSTSLSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTVDI 293
           MAS++  VLQF P STSLSAKVHPLVIFNICDC+VRRPDQAERVIGTLLGS+ PDGTVDI
Sbjct: 1   MASSESAVLQFFPSSTSLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSISPDGTVDI 60

Query: 294 RNSYAVPHNEFSD 332
           RNSYAVPHNE SD
Sbjct: 61  RNSYAVPHNESSD 73


>emb|CAN80292.1| hypothetical protein VITISV_032012 [Vitis vinifera]
          Length = 354

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/73 (86%), Positives = 67/73 (91%)
 Frame = +3

Query: 114 MASTDQTVLQFVPLSTSLSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTVDI 293
           MAS++  VLQF P STSLSAKVHPLVIFNICDC+VRRPDQAERVIGTLLGS+ PDGTVDI
Sbjct: 1   MASSESAVLQFFPSSTSLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSISPDGTVDI 60

Query: 294 RNSYAVPHNEFSD 332
           RNSYAVPHNE SD
Sbjct: 61  RNSYAVPHNESSD 73


>ref|XP_004138431.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           F-like [Cucumis sativus]
           gi|449517876|ref|XP_004165970.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit F-like [Cucumis
           sativus]
          Length = 285

 Score =  130 bits (328), Expect = 8e-29
 Identities = 63/73 (86%), Positives = 68/73 (93%)
 Frame = +3

Query: 114 MASTDQTVLQFVPLSTSLSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTVDI 293
           MA+T+ TVLQF   S +LSAKVHPLVIFNICDC+VRRPDQA+RVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSHSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 294 RNSYAVPHNEFSD 332
           RNSYAVPHNEFSD
Sbjct: 61  RNSYAVPHNEFSD 73


>ref|XP_002526864.1| eukaryotic translation initiation factor 3f, eif3f, putative
           [Ricinus communis] gi|223533763|gb|EEF35495.1|
           eukaryotic translation initiation factor 3f, eif3f,
           putative [Ricinus communis]
          Length = 287

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/75 (86%), Positives = 69/75 (92%), Gaps = 2/75 (2%)
 Frame = +3

Query: 114 MASTDQTVLQFV--PLSTSLSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTV 287
           MA+++QTVLQF   P ST LSAKVHPLVIFNICDC+VRRPDQAERVIGTLLGSVLPDGTV
Sbjct: 1   MAASEQTVLQFTSAPSSTGLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTV 60

Query: 288 DIRNSYAVPHNEFSD 332
           DIRNSYAVPHNE SD
Sbjct: 61  DIRNSYAVPHNESSD 75


>ref|XP_002315172.1| predicted protein [Populus trichocarpa] gi|118484603|gb|ABK94175.1|
           unknown [Populus trichocarpa]
           gi|222864212|gb|EEF01343.1| predicted protein [Populus
           trichocarpa]
          Length = 287

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/73 (86%), Positives = 66/73 (90%), Gaps = 1/73 (1%)
 Frame = +3

Query: 117 ASTDQTVLQFVPLSTS-LSAKVHPLVIFNICDCFVRRPDQAERVIGTLLGSVLPDGTVDI 293
           A   QTVLQF P S+S LSAKVHPLVIFNICDC+VRRPDQAERVIGTLLGSVLPDGTVDI
Sbjct: 3   AIEQQTVLQFAPSSSSTLSAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDI 62

Query: 294 RNSYAVPHNEFSD 332
           RNSYAVPHNE S+
Sbjct: 63  RNSYAVPHNESSE 75


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