BLASTX nr result

ID: Atractylodes21_contig00027236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027236
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282260.1| PREDICTED: uncharacterized protein LOC100266...    65   4e-09
gb|AFK37955.1| unknown [Medicago truncatula]                           60   1e-07
ref|XP_002312390.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002314871.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002282260.1| PREDICTED: uncharacterized protein LOC100266408 [Vitis vinifera]
           gi|147856928|emb|CAN78631.1| hypothetical protein
           VITISV_000032 [Vitis vinifera]
           gi|297737835|emb|CBI27036.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/83 (43%), Positives = 50/83 (60%)
 Frame = -1

Query: 403 TFPLVQEVVVLADFGCKRCRDRVADIVSRANGKMESIEIMTMEKRVILTFTSKYSRATKV 224
           T PL+QEVV+ ADF C  C+ R+A I+SR N +MES+E+  +EK+V LT      R T  
Sbjct: 36  TMPLIQEVVISADFQCVECQKRIAAIISRMNAEMESVEVNVLEKKVTLT-----CRPTS- 89

Query: 223 NGKKLEAAMIYKNMVNRFSNIKQ 155
                + A IY+N   + + IKQ
Sbjct: 90  -----QVAAIYRNPFRKVALIKQ 107


>gb|AFK37955.1| unknown [Medicago truncatula]
          Length = 124

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
 Frame = -1

Query: 403 TFPLVQEVVVLADFGCKRCRDRVADIVSRANGKMESIEIMTMEKRVILTF-TSKYSRATK 227
           + PLVQEVV+ AD  C+ C+ RVADI+++ N + ESI +  +EK+VILTF  S  +   K
Sbjct: 36  SLPLVQEVVLSADMQCETCQKRVADIITKMNAETESIVVNVLEKKVILTFRISTTTTVGK 95

Query: 226 VNGKKL 209
           V  KK+
Sbjct: 96  VISKKV 101


>ref|XP_002312390.1| predicted protein [Populus trichocarpa] gi|222852210|gb|EEE89757.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/87 (39%), Positives = 52/87 (59%)
 Frame = -1

Query: 403 TFPLVQEVVVLADFGCKRCRDRVADIVSRANGKMESIEIMTMEKRVILTFTSKYSRATKV 224
           T PLVQE+V+ AD  C  C+ R+ADI+SR N ++ES+ I  +EK+V  T T +Y      
Sbjct: 15  TLPLVQEIVLSADIRCAECQRRLADIMSRTN-EIESVLINVLEKKV--TLTCRYPGMKVT 71

Query: 223 NGKKLEAAMIYKNMVNRFSNIKQFLLS 143
            G   + A +Y+N + + + IK+   S
Sbjct: 72  TG---QVAAVYRNPLGKIATIKRIFRS 95


>ref|XP_002314871.1| predicted protein [Populus trichocarpa] gi|222863911|gb|EEF01042.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/87 (40%), Positives = 49/87 (56%)
 Frame = -1

Query: 403 TFPLVQEVVVLADFGCKRCRDRVADIVSRANGKMESIEIMTMEKRVILTFTSKYSRATKV 224
           T PLVQ VV+ AD  C  C+ RVADI+SR N + ES+ I  +EK+V LT      R   V
Sbjct: 36  TVPLVQVVVLSADIRCAECQRRVADIMSRMN-ETESVSINVLEKKVTLT-----CRYPVV 89

Query: 223 NGKKLEAAMIYKNMVNRFSNIKQFLLS 143
                + A +Y+N + + + IK+   S
Sbjct: 90  RVSTRQVAAVYRNPLGKMAVIKRIFRS 116


Top