BLASTX nr result

ID: Atractylodes21_contig00027235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027235
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527667.1| ring finger protein, putative [Ricinus commu...   225   1e-56
ref|XP_002303424.1| predicted protein [Populus trichocarpa] gi|2...   210   4e-52
gb|ACU17851.1| unknown [Glycine max]                                  207   4e-51
ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   206   8e-51
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   204   2e-50

>ref|XP_002527667.1| ring finger protein, putative [Ricinus communis]
           gi|223532972|gb|EEF34738.1| ring finger protein,
           putative [Ricinus communis]
          Length = 383

 Score =  225 bits (573), Expect = 1e-56
 Identities = 112/205 (54%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
 Frame = -3

Query: 616 MGSLKDPKTWIPQINPKDCSKKICNLYCTKWCNYIIXXXXXXXXPE---DDQGGATLSPL 446
           M SL  PKTWIP +N KDCSK  C+LYC +WC  I          +   DD  G T SPL
Sbjct: 1   MASLGTPKTWIPYVNGKDCSKGFCSLYCPQWCYIIFPPPPPPPPYDEFPDDNSGPTFSPL 60

Query: 445 VXXXXXXXXXXXXXXGYYIIISQYCFRNNESSSRRDGNQETLHPEMGVDGHGEVDDHSN- 269
           V               YY IIS+YC  NN  S+RR  NQ+ +          E++D+ N 
Sbjct: 61  VIAIIGILVSAFLLVSYYTIISKYCGNNNNDSARRRENQDQIE---------ELEDNHNP 111

Query: 268 --HVPWLVLGKGLDEAVIKSITICKYKRGDGLVSCTDCSVCLGEFQEDESIRLLPKCSHA 95
             H PW V   GLDEA+IKSIT+CKY++GDGL+  TDCSVCL EFQEDESIRLLPKCSHA
Sbjct: 112 SLHEPWHVTTTGLDEALIKSITMCKYRKGDGLIEGTDCSVCLSEFQEDESIRLLPKCSHA 171

Query: 94  FHVYCIDTWLKTHSNCPLCRAKVCF 20
           FHV CIDTWLK+HSNCPLCRA + F
Sbjct: 172 FHVSCIDTWLKSHSNCPLCRANIIF 196


>ref|XP_002303424.1| predicted protein [Populus trichocarpa] gi|222840856|gb|EEE78403.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  210 bits (534), Expect = 4e-52
 Identities = 107/205 (52%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
 Frame = -3

Query: 616 MGSLKDPKTWIPQINPKDCSKKICNLYCTKWCNYIIXXXXXXXXPEDDQGGATLSPLVXX 437
           M SL  P+TWIP +N KDCS+  C+LYC +WC YII          DD      SPLV  
Sbjct: 1   MASLDAPQTWIPHVNIKDCSQGFCSLYCPQWC-YIISPPPPPFEFPDDDSSPIFSPLVIA 59

Query: 436 XXXXXXXXXXXXGYYIIISQYCFRNNESSSRRDGNQETLHPEMGVDGHGE----VDDHSN 269
                        YY IIS+YC  N+ S+ RRD N            HG+     DDH++
Sbjct: 60  IIGILASAFLLVCYYTIISKYC-GNDYSARRRDQN------------HGQNEEFEDDHNS 106

Query: 268 --HVPWLVLGKGLDEAVIKSITICKYKRGDGLVSCTDCSVCLGEFQEDESIRLLPKCSHA 95
             H PW     G+DEA+I+SIT+CKYK+GDGL+  TDCSVCL EF+EDESIRLLPKCSHA
Sbjct: 107 SLHEPWHAATTGVDEALIRSITVCKYKKGDGLIEGTDCSVCLSEFEEDESIRLLPKCSHA 166

Query: 94  FHVYCIDTWLKTHSNCPLCRAKVCF 20
           FHV CIDTWL++HSNCPLCRA + F
Sbjct: 167 FHVPCIDTWLRSHSNCPLCRANIVF 191


>gb|ACU17851.1| unknown [Glycine max]
          Length = 364

 Score =  207 bits (526), Expect = 4e-51
 Identities = 102/199 (51%), Positives = 127/199 (63%), Gaps = 2/199 (1%)
 Frame = -3

Query: 616 MGSLKDPKTWIPQINPKDCSKKICNLYCTKWCNYIIXXXXXXXXPEDDQGGATLSPLVXX 437
           M SL +PK+W+P +N KDCS+  C+LYC +WC Y+I          DD      SPLV  
Sbjct: 1   MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWC-YVIYPPPPPFEFPDDDSSPNFSPLVIA 59

Query: 436 XXXXXXXXXXXXGYYIIISQYCFRNNESSSRRDGNQETLHPEMGVDGHGEVDDH--SNHV 263
                        YY IIS+YC   +  SS+ + ++E +  E         +DH  S H 
Sbjct: 60  VIGVLVSAFLLVSYYTIISKYC--GSRESSQSENHEENVELE---------EDHNPSLHE 108

Query: 262 PWLVLGKGLDEAVIKSITICKYKRGDGLVSCTDCSVCLGEFQEDESIRLLPKCSHAFHVY 83
           PW     GLDEA+IKSIT+CKYK+GDGLV  TDCSVCLGEFQ+DES+RLLPKCSHAFH+ 
Sbjct: 109 PWHAPTIGLDEALIKSITVCKYKKGDGLVEVTDCSVCLGEFQDDESVRLLPKCSHAFHLP 168

Query: 82  CIDTWLKTHSNCPLCRAKV 26
           CIDTWLK+HS+CPLCRA +
Sbjct: 169 CIDTWLKSHSSCPLCRASI 187


>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
           vinifera]
          Length = 375

 Score =  206 bits (523), Expect = 8e-51
 Identities = 104/200 (52%), Positives = 124/200 (62%), Gaps = 3/200 (1%)
 Frame = -3

Query: 616 MGSLKDPKTWIPQINPKDCSKKICNLYCTKWCNYIIXXXXXXXXPEDDQGGATLSPLVXX 437
           MGSL  PK W+P I+ KDCS+  C+LYC +WC YI           D+  G   SPLV  
Sbjct: 1   MGSLGSPKIWVPYISTKDCSQGFCSLYCPQWC-YIPAPPPPYFEFPDENSGPNFSPLVIA 59

Query: 436 XXXXXXXXXXXXGYYIIISQYCFRNNESSSRRDGNQETLHPEMGVDGHGEVDDHSN---H 266
                        YY IIS+YC   N    RR+            D + E++D+ N   H
Sbjct: 60  IIGILASAFLLVSYYTIISKYC--GNMERERRENQ----------DINEELEDNHNPALH 107

Query: 265 VPWLVLGKGLDEAVIKSITICKYKRGDGLVSCTDCSVCLGEFQEDESIRLLPKCSHAFHV 86
            PW V   GLDEA+IKSIT+CKYK+GDGLV  TDCSVCL EF+E+ES+RLLPKCSHAFHV
Sbjct: 108 EPWHVATTGLDEALIKSITLCKYKKGDGLVEGTDCSVCLSEFEEEESLRLLPKCSHAFHV 167

Query: 85  YCIDTWLKTHSNCPLCRAKV 26
            CIDTWLK+HSNCPLCRA +
Sbjct: 168 QCIDTWLKSHSNCPLCRANI 187


>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score =  204 bits (520), Expect = 2e-50
 Identities = 101/199 (50%), Positives = 126/199 (63%), Gaps = 2/199 (1%)
 Frame = -3

Query: 616 MGSLKDPKTWIPQINPKDCSKKICNLYCTKWCNYIIXXXXXXXXPEDDQGGATLSPLVXX 437
           M SL +PK+W+P +N KDCS+  C+LYC +WC Y+I          DD      SPLV  
Sbjct: 1   MASLGNPKSWVPYMNNKDCSQGFCSLYCPQWC-YVIYPPPPPFEFPDDDSSPNFSPLVIA 59

Query: 436 XXXXXXXXXXXXGYYIIISQYCFRNNESSSRRDGNQETLHPEMGVDGHGEVDDH--SNHV 263
                        YY IIS+YC   +  SS+ + ++E +  E         +DH  S H 
Sbjct: 60  VIGVLVSAFLLVSYYTIISKYC--GSRESSQSENHEENVELE---------EDHNPSLHE 108

Query: 262 PWLVLGKGLDEAVIKSITICKYKRGDGLVSCTDCSVCLGEFQEDESIRLLPKCSHAFHVY 83
           PW     GLDEA+IKSIT+CKYK+GDGLV  TDCSVCL EFQ+DES+RLLPKCSHAFH+ 
Sbjct: 109 PWHAPTIGLDEALIKSITVCKYKKGDGLVEVTDCSVCLSEFQDDESVRLLPKCSHAFHLP 168

Query: 82  CIDTWLKTHSNCPLCRAKV 26
           CIDTWLK+HS+CPLCRA +
Sbjct: 169 CIDTWLKSHSSCPLCRASI 187


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