BLASTX nr result

ID: Atractylodes21_contig00027203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027203
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding pr...   114   6e-24
ref|XP_002519416.1| polyadenylate-binding protein, putative [Ric...   102   4e-20
ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding pr...    95   5e-18
ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding pr...    93   3e-17
ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding pr...    84   1e-14

>ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
           vinifera] gi|297740018|emb|CBI30200.3| unnamed protein
           product [Vitis vinifera]
          Length = 634

 Score =  114 bits (286), Expect = 6e-24
 Identities = 75/162 (46%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
 Frame = +2

Query: 23  GGHTFPYVPHLQQPAHT--SKESSSNLQRSGQAKHVPNKRSRDINKEIRXXXXXXXXXXX 196
           GGH+  ++PHLQQP     S + S N QR+GQAK+VPN RS +++K              
Sbjct: 474 GGHSTAFMPHLQQPTQPVISPKDSINQQRAGQAKYVPNGRSYEMSKGSGIPSAASNSVGT 533

Query: 197 XXXXXXXXXXXXXXXQ-EIQKQILGERLYPLVNHQKPDLAAKITGMXXXXXXXXXXXXXX 373
                            E QKQILGE LYPLV  QKPDLAAKITGM              
Sbjct: 534 GSQGSEMLSSMLAAASPEQQKQILGEHLYPLVQKQKPDLAAKITGMLLEMDNSELLLLLE 593

Query: 374 XXXXXAAKVEEAVQVLKLSKTKVSTSQESLHPNILSAGVAAN 499
                AAKVEEAVQVLKLSK+K S  Q++LHP+ L+A VA N
Sbjct: 594 SPESLAAKVEEAVQVLKLSKSKPS-GQDTLHPSYLAAEVAVN 634


>ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223541279|gb|EEF42830.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 632

 Score =  102 bits (253), Expect = 4e-20
 Identities = 79/179 (44%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
 Frame = +2

Query: 5   QMQQPQG-----GHTFPY-----VPHLQQPAH--TSKESSSNLQRSGQAKHVPNKRSRDI 148
           Q Q  QG     GH  P      V ++QQPA   TS +  SN QR+GQAK+VPN R+ D+
Sbjct: 456 QRQHKQGRVRMNGHVLPQGGTQSVSYVQQPAQPLTSLKDPSN-QRAGQAKYVPNGRTCDV 514

Query: 149 NKEIRXXXXXXXXXXXXXXXXXXXXXXXXXXQ-EIQKQILGERLYPLVNHQKPDLAAKIT 325
           +K                               + QKQILGE+LYPLV   KPDL AKIT
Sbjct: 515 SKGSGVLSAAPNSTGPVSQGSEVLSSMLAAASPDEQKQILGEQLYPLVRKHKPDLVAKIT 574

Query: 326 GMXXXXXXXXXXXXXXXXXXXAAKVEEAVQVLKLS-KTKVSTSQESLHPNILSAGVAAN 499
           GM                   AAKVEEAVQVLK+S KTKVS  Q++LHPN LSA VA N
Sbjct: 575 GMLLEMDNSELLLLLESPESLAAKVEEAVQVLKISNKTKVS-GQDTLHPNYLSAEVAVN 632


>ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 632

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 67/157 (42%), Positives = 79/157 (50%)
 Frame = +2

Query: 29  HTFPYVPHLQQPAHTSKESSSNLQRSGQAKHVPNKRSRDINKEIRXXXXXXXXXXXXXXX 208
           H+  Y+P  QQ +     SSS  QR+GQAK++P+ R RD+ K                  
Sbjct: 478 HSVTYLPQAQQISQPVI-SSSTQQRTGQAKYLPSGRQRDMEKGSGSSSSGSNSGRGSQGS 536

Query: 209 XXXXXXXXXXXQEIQKQILGERLYPLVNHQKPDLAAKITGMXXXXXXXXXXXXXXXXXXX 388
                       E QK+ILGE LY LV+  KP LAAKITGM                   
Sbjct: 537 EMLHSMLAGAAPEQQKEILGEHLYMLVHKLKPTLAAKITGMLLEMDNGELLLLLESPESL 596

Query: 389 AAKVEEAVQVLKLSKTKVSTSQESLHPNILSAGVAAN 499
           +AKVEEAVQVLK SKTKVS  Q+ LH N LSA VA N
Sbjct: 597 SAKVEEAVQVLKNSKTKVS-GQDVLHSNFLSAEVAVN 632


>ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 636

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 67/161 (41%), Positives = 83/161 (51%), Gaps = 4/161 (2%)
 Frame = +2

Query: 29  HTFPYVPHLQQ---PAHTSKESSSNLQRSGQAKHVPNKRSRDINKEI-RXXXXXXXXXXX 196
           H+  Y+P  QQ   P  +S++SS+  QR+GQA+++P+ R RD+ K               
Sbjct: 478 HSGTYLPQAQQISQPVISSRDSSTQ-QRTGQARYIPSGRQRDVEKGSGSSSVGSNSGRGG 536

Query: 197 XXXXXXXXXXXXXXXQEIQKQILGERLYPLVNHQKPDLAAKITGMXXXXXXXXXXXXXXX 376
                           E QK+ILGE LY LV+  KP LAAKITGM               
Sbjct: 537 SQGSEMLHSLLAGAAPEQQKEILGEHLYMLVHKLKPTLAAKITGMLLEMDNGELLLLLES 596

Query: 377 XXXXAAKVEEAVQVLKLSKTKVSTSQESLHPNILSAGVAAN 499
               +AKVEEAVQVLK SKTKVS  Q+ LH N LSA VA N
Sbjct: 597 PESLSAKVEEAVQVLKNSKTKVS-GQDVLHSNFLSAEVAVN 636


>ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Cucumis sativus] gi|449521207|ref|XP_004167621.1|
           PREDICTED: probable polyadenylate-binding protein
           At2g36660-like [Cucumis sativus]
          Length = 640

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 61/143 (42%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
 Frame = +2

Query: 80  ESSSNLQRSGQAKHVPNKRSRDINKEIRXXXXXXXXXXXXXXXXXXXXXXXXXXQ---EI 250
           +SSSN Q +GQ K+VPN RS + NK                                 + 
Sbjct: 501 KSSSNQQWTGQVKYVPNARSCETNKTSGASAAAAAFNSVGDVSQGSQILSSMLASSPPDQ 560

Query: 251 QKQILGERLYPLVNHQKPDLAAKITGMXXXXXXXXXXXXXXXXXXXAAKVEEAVQVLKLS 430
           QKQILGE LYPLV  +KPDLAAKITGM                   AAKVEEAVQVLK+S
Sbjct: 561 QKQILGEHLYPLVQKRKPDLAAKITGMLLEMDNSELLLLLESPESLAAKVEEAVQVLKIS 620

Query: 431 KTKVSTSQESLHPNILSAGVAAN 499
           KTK+S +Q++L  + L A +A N
Sbjct: 621 KTKLS-NQDTL--SFLPAELAVN 640


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