BLASTX nr result

ID: Atractylodes21_contig00027199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027199
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    90   4e-16
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    80   4e-13
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    77   2e-12
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    65   9e-09

>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 8/141 (5%)
 Frame = +3

Query: 3   EFGIFSTIYQGKEIPNWISHRSKGSSISFTMPSSPN-KLRGINFC--YAMTNSN----WY 161
           E GIFS    G E+P+W SH+ + +S+SF +P  P+ K+RG+N C  Y + N++      
Sbjct: 279 EQGIFSIFLPGSEVPSWYSHQKQNNSVSFAVPPLPSRKIRGLNLCIVYGLRNTDKKCATL 338

Query: 162 EMPDIRIINVTKDCCWTWTYLWSG-PRAFGNLIFLSHWMFGKNEMEDGDQVTIDIGYFYY 338
             PD  I N TK   W++  +  G P+   ++++LSHW FG +++E GDQV +       
Sbjct: 339 YPPDAEISNKTKVLKWSYNPIVYGVPQIGEDMLWLSHWRFGTDQLEVGDQVNVSASV--- 395

Query: 339 NRMQERPVLIIKECGISLVYD 401
                 P   +K+CG+ LVY+
Sbjct: 396 -----TPDFQVKKCGVHLVYE 411


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 18/178 (10%)
 Frame = +3

Query: 3    EFGIFSTIYQGKEIPNWISHRSKGSSISFTM-PSSPNKLRGINFCYAMTNSN---WYEMP 170
            E GI S    G E+P+W  H+S GSS+SFT+ P S  K+RG+N C      +   W    
Sbjct: 890  ECGIVSFFLAGNEVPHWFDHKSTGSSLSFTINPLSDYKIRGLNLCTVYARDHEVYWLHAA 949

Query: 171  D--IRIINVTKDCCWTW--TYLWSGPRAFGNLIFLSHWMFGKNEMEDGDQVTIDI----G 326
                R+ N TK   W++  T+         ++++LS+W FG  E E GD+V + +    G
Sbjct: 950  GHYARMNNETKGTNWSYSPTFYALPEDDDEDMLWLSYWKFG-GEFEVGDKVNVSVRMPFG 1008

Query: 327  YFYYNRMQERPVLIIKECGISLVYDDGKMEE-----DPLAYYKSWN-HIIGGDLSPFQ 482
            Y+            +KECGI +VY++ + +      D +     W+ +I   DLSP+Q
Sbjct: 1009 YY------------VKECGIRIVYEENEKDNQSNTADIIPSNSFWHQNITDRDLSPYQ 1054


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 32/212 (15%)
 Frame = +3

Query: 3    EFGIFSTIYQGKEIPNWISHRSKGSSISFTMPSSP-NKLRGINFC----YAMTNSNWYEM 167
            E GIFS    G  IP W + RS+ SSISF + + P +K++G++ C    Y       Y  
Sbjct: 979  ECGIFSIFLPGNTIPEWFNQRSESSSISFEVEAKPGHKIKGLSLCTLYTYDKLEGGGYID 1038

Query: 168  PDIRIINVTKDCCWTWTY---LWSGPRAFGNLIFLSHWMFGKNEMEDGDQVTIDIGYFYY 338
             +   IN  K  C  WTY    +  P+    +++LSHW FG +++E GD+V I       
Sbjct: 1039 ENCAKIN-NKTICEKWTYSPTFYGMPKPLEEMLWLSHWTFG-DQLEVGDEVHI------- 1089

Query: 339  NRMQERPVLIIKECGISLVYDDGKMEED--PLAYYKSWNHIIG---------GDLS---- 473
              ++    L +K+CGI L+Y++    ++    +   SW   +          G  S    
Sbjct: 1090 -LVEMASGLTVKKCGIRLIYEEESTTQEIAESSSSSSWYRTMADTDMEAYELGTASYYLC 1148

Query: 474  --PFQKHAGTSR-------GGEYVLDRRSLQP 542
               FQ H G+ R       G EY+ + R   P
Sbjct: 1149 HHKFQTHQGSGRYDWDNLSGYEYIFEERMEDP 1180


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 65.5 bits (158), Expect = 9e-09
 Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
 Frame = +3

Query: 3    EFGIFSTIYQGKEIPNWISHRSKGSSISFTM-PSSPNKLRGINFCYAMT----NSNWYEM 167
            E GI S    G E+P W S +++G  ISFTM PS   K+ G+N C   T     +   + 
Sbjct: 968  ECGICSIFLPGSEVPGWYSPQNEGPLISFTMPPSHVRKVCGLNICIVYTCNDVRNGLTDH 1027

Query: 168  PDIRIINVTKDCCWTWTYLWSG-PRAFGNLIFLSHWMFGKNEMEDGDQVTI 317
              I+I N TKD  WT++ ++ G P    ++++LSHW   ++ +E GDQ+ +
Sbjct: 1028 HYIKIWNKTKDLKWTYSPIFYGIPEPEKSMLWLSHWKL-EDLLEGGDQLNV 1077


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