BLASTX nr result

ID: Atractylodes21_contig00027192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027192
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    74   2e-11
emb|CBI21539.3| unnamed protein product [Vitis vinifera]               73   6e-11
emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]    73   6e-11
ref|XP_002310049.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-10
ref|XP_004170644.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    72   1e-10

>ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Vitis
           vinifera]
          Length = 641

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 52/158 (32%), Positives = 67/158 (42%)
 Frame = +2

Query: 209 WVTSSGFQISLASSILSVAGLILALRDGRGRRSFNNXXXXXXXXXXXXXXXXKLWVVPXX 388
           W + SG  IS+A  +LS+AG ++A++D +                       +L + P  
Sbjct: 28  WFSISGLHISVAG-LLSIAGFVVAIKDNK-----MGNFGSLPWSSERGDFSSELCLAPGL 81

Query: 389 XXXXXXXXXXXXXXXXXXXXXXXXXXXRIVXXXXXXXXXXQNGDMPLAVSLNALLQELCI 568
                                      RI+              +PL  +L  LL+ELC 
Sbjct: 82  QNLGNNCFLNVILQALASCFCFRQFLHRIMEESKSSLDEEGVESLPLTTALTTLLEELCA 141

Query: 569 VRHEGKVLSPRKVMLAMALYTPNFNLTSQQDAEEALAH 682
                KVLSPRKVMLAMALY PNFNLT QQDA EA  H
Sbjct: 142 THGGRKVLSPRKVMLAMALYIPNFNLTRQQDAAEAFLH 179


>emb|CBI21539.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 36/54 (66%), Positives = 39/54 (72%)
 Frame = +2

Query: 521 MPLAVSLNALLQELCIVRHEGKVLSPRKVMLAMALYTPNFNLTSQQDAEEALAH 682
           +PL  +L  LL+ELC      KVLSPRKVMLAMALY PNFNLT QQDA EA  H
Sbjct: 71  LPLTTALTTLLEELCATHGGRKVLSPRKVMLAMALYIPNFNLTRQQDAAEAFLH 124


>emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]
          Length = 559

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 36/54 (66%), Positives = 39/54 (72%)
 Frame = +2

Query: 521 MPLAVSLNALLQELCIVRHEGKVLSPRKVMLAMALYTPNFNLTSQQDAEEALAH 682
           +PL  +L  LL+ELC      KVLSPRKVMLAMALY PNFNLT QQDA EA  H
Sbjct: 71  LPLTTALTTLLEELCATHGGRKVLSPRKVMLAMALYIPNFNLTRQQDAAEAFLH 124


>ref|XP_002310049.1| predicted protein [Populus trichocarpa] gi|222852952|gb|EEE90499.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 5/164 (3%)
 Frame = +2

Query: 206 HWVTSSGFQISLASSILSVAGLILALRDGRGRRSFNNXXXXXXXXXXXXXXXX-----KL 370
           +WV++SG      +++L VAGL+LAL   +  +S+N                      KL
Sbjct: 4   NWVSASGL-----AAVLGVAGLVLALI--KDPKSWNLKLSVLPSWLELNQRENNNRPKKL 56

Query: 371 WVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIVXXXXXXXXXXQNGDMPLAVSLNAL 550
           +++P                             +++           N  + L V+L AL
Sbjct: 57  FLLPGLQNLGNNCFLNVILQALGSCSNFQSFLQKVIEEWESFAGEEWNESLQLTVALAAL 116

Query: 551 LQELCIVRHEGKVLSPRKVMLAMALYTPNFNLTSQQDAEEALAH 682
           L+EL ++  E  VLSPRKVMLAMA Y  NFNLTSQQDAEEA  H
Sbjct: 117 LEELSVISRESIVLSPRKVMLAMAHYIQNFNLTSQQDAEEAFLH 160


>ref|XP_004170644.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Cucumis
           sativus]
          Length = 210

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/54 (70%), Positives = 42/54 (77%)
 Frame = +2

Query: 521 MPLAVSLNALLQELCIVRHEGKVLSPRKVMLAMALYTPNFNLTSQQDAEEALAH 682
           +PL VSL ALL+EL  +  E  VLSPRKVMLAMA YTPNF+LTSQQDA EA  H
Sbjct: 107 LPLTVSLAALLEELGEISLERVVLSPRKVMLAMAYYTPNFSLTSQQDAAEAFLH 160


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