BLASTX nr result

ID: Atractylodes21_contig00027166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027166
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595880.1| Mediator of RNA polymerase II transcription ...    87   2e-15
ref|XP_003546670.1| PREDICTED: putative mediator of RNA polymera...    86   4e-15
ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II tra...    84   9e-15
gb|AFW79965.1| surfeit locus protein 5 [Zea mays]                      84   2e-14
ref|XP_002458438.1| hypothetical protein SORBIDRAFT_03g033580 [S...    84   2e-14

>ref|XP_003595880.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355484928|gb|AES66131.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 150

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/52 (82%), Positives = 48/52 (92%)
 Frame = -1

Query: 156 QKQKSLQQRVDNDIGSIVDNFSIVVNVARVNDPPVRNSQEAFMMEVRAARMV 1
           QKQK+L QRV+ DI +IVDNFS +VNVARVNDPPVRNSQEAFMME+RAARMV
Sbjct: 21  QKQKTLLQRVEGDIANIVDNFSHLVNVARVNDPPVRNSQEAFMMEMRAARMV 72


>ref|XP_003546670.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 22-like [Glycine max]
          Length = 156

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -1

Query: 156 QKQKSLQQRVDNDIGSIVDNFSIVVNVARVNDPPVRNSQEAFMMEVRAARMV 1
           QKQK+L QRV+ DI +IVDNF+ +VNVARVNDPPVRNSQEAFMME+RAARMV
Sbjct: 27  QKQKTLLQRVEGDIANIVDNFNHLVNVARVNDPPVRNSQEAFMMEMRAARMV 78


>ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II transcription subunit 22
           [Vitis vinifera] gi|297736089|emb|CBI24127.3| unnamed
           protein product [Vitis vinifera]
          Length = 150

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/52 (76%), Positives = 48/52 (92%)
 Frame = -1

Query: 156 QKQKSLQQRVDNDIGSIVDNFSIVVNVARVNDPPVRNSQEAFMMEVRAARMV 1
           QKQK+L QRV+ DI ++VD+F+ +VNVARVNDPPVRNSQEAFMME+RAARMV
Sbjct: 21  QKQKTLLQRVETDIANVVDHFTFLVNVARVNDPPVRNSQEAFMMEMRAARMV 72


>gb|AFW79965.1| surfeit locus protein 5 [Zea mays]
          Length = 239

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -1

Query: 156 QKQKSLQQRVDNDIGSIVDNFSIVVNVARVNDPPVRNSQEAFMMEVRAARMV 1
           QKQKSL Q+ D D+ S+VDNFS ++N+ARVNDPPVRNSQEAF ME+RAARMV
Sbjct: 112 QKQKSLLQKADADVSSLVDNFSSLINIARVNDPPVRNSQEAFQMEMRAARMV 163


>ref|XP_002458438.1| hypothetical protein SORBIDRAFT_03g033580 [Sorghum bicolor]
           gi|241930413|gb|EES03558.1| hypothetical protein
           SORBIDRAFT_03g033580 [Sorghum bicolor]
          Length = 151

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/52 (75%), Positives = 46/52 (88%)
 Frame = -1

Query: 156 QKQKSLQQRVDNDIGSIVDNFSIVVNVARVNDPPVRNSQEAFMMEVRAARMV 1
           QKQKSL Q+ D D+ S+VDNFS ++N+ARVNDPPVRNSQEAF ME+RAARMV
Sbjct: 24  QKQKSLLQKADADVSSLVDNFSSLINIARVNDPPVRNSQEAFQMEMRAARMV 75


Top