BLASTX nr result

ID: Atractylodes21_contig00027148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027148
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27434.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata sub...    84   1e-14
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    82   6e-14

>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/104 (39%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
 Frame = -3

Query: 323 RNGFIRIINLLVMLHRGPISKFSLHIPNMDLDSFQEIDQWMLFLSRNSVRELVLANSN-R 147
           +N  +  +  +++LH+GPI KF L +   +L+S+ +ID W+ FLS + ++E  L+ +   
Sbjct: 103 KNELVSAVYQVLLLHKGPIVKFVLEVD--ELESYSDIDHWINFLSNHDIQEFTLSRAKTE 160

Query: 146 RYELPSYVFSCLELRKLKLTTCIFKPPLEFEGFLNLVDLFLKNV 15
            Y+LPSY F+ L LR LKL  C F+PP  F+GF  L+ L L+++
Sbjct: 161 HYKLPSYFFTFLHLRHLKLRGCAFRPPPRFKGFSKLISLQLEDI 204


>ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338601|gb|EFH69018.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/99 (43%), Positives = 62/99 (62%)
 Frame = -3

Query: 311 IRIINLLVMLHRGPISKFSLHIPNMDLDSFQEIDQWMLFLSRNSVRELVLANSNRRYELP 132
           +R I  +++LH+GPI KF L      L    +IDQW+LFLSRN ++ELVL      + +P
Sbjct: 69  VRFITGVLLLHQGPIHKFQLS--TSFLQCRPDIDQWLLFLSRNGIKELVLELGEGEFRVP 126

Query: 131 SYVFSCLELRKLKLTTCIFKPPLEFEGFLNLVDLFLKNV 15
           S +F+CL+L +L+L  C F PP  F+GF +L  L L  +
Sbjct: 127 SCLFNCLKLTRLELCHCEFDPPQYFKGFSSLKSLNLHQI 165


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/104 (44%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = -3

Query: 323 RNGFIRIINLLVMLHRGPISKFSLHIPNMDLDSFQEIDQWMLFLSRNSVRELVLAN-SNR 147
           +N  + II+ +++LH GPI KF L   + DL +  +ID+W+L LSR S +E VL     +
Sbjct: 155 KNKLVNIIDHILLLHNGPIYKFKLS--HCDLLAVSDIDRWILHLSRGSTKEFVLEIWKGQ 212

Query: 146 RYELPSYVFSCLELRKLKLTTCIFKPPLEFEGFLNLVDLFLKNV 15
           +Y+LPS +FS   L  L+L  C+ KPPL F+GF NL +L L++V
Sbjct: 213 QYKLPSCLFSFKNLVYLELFNCLLKPPLAFKGFRNLKNLDLQHV 256


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = -3

Query: 323 RNGFIRIINLLVMLHRGPISKFSLHIPNMDLDSFQEIDQWMLFLSRNSVRELVLAN-SNR 147
           +N  + II+ +++LH GPI KF L   + DL    +ID+W+L LSR S +E VL     +
Sbjct: 66  KNNLVNIIDNVLLLHNGPIYKFKLS--HRDLLGVSDIDRWILHLSRGSTKEFVLEIWKGQ 123

Query: 146 RYELPSYVFSCLELRKLKLTTCIFKPPLEFEGFLNLVDLFLKNV 15
           RY+LPS +FS   L  L+L  C+ KPP  F+GF NL  L L++V
Sbjct: 124 RYKLPSCLFSFENLTHLELFNCLLKPPPAFKGFRNLKSLDLQHV 167


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 427

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = -3

Query: 323 RNGFIRIINLLVMLHRGPISKFSLHIPNMDLDSFQEIDQWMLFLSRNSVRELVLAN-SNR 147
           +N  +RII+ +++LH GPI+KF L   + DL    +ID+W L L R S++E VL     +
Sbjct: 77  KNKLLRIIDHVLLLHSGPINKFKLS--HRDLIGVTDIDRWTLHLCRKSIKEFVLEIWKGQ 134

Query: 146 RYELPSYVFSCLELRKLKLTTCIFKPPLEFEGFLNLVDLFLKNV 15
           RY++ S +FSC  L  L+L  C  KPP  F+GF NL  L L++V
Sbjct: 135 RYKIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNLKSLDLQHV 178


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