BLASTX nr result

ID: Atractylodes21_contig00027147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027147
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata sub...    57   2e-06
ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein...    55   8e-06
dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]                 55   8e-06

>ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338601|gb|EFH69018.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = -2

Query: 221 EVNQWMLFLSRNSVRVLVLTSSNRPYELPSYVFSCLELKMLILTTCIFKPPLEFERLLNL 42
           +++QW+LFLSRN ++ LVL      + +PS +F+CL+L  L L  C F PP  F+   +L
Sbjct: 98  DIDQWLLFLSRNGIKELVLELGEGEFRVPSCLFNCLKLTRLELCHCEFDPPQYFKGFSSL 157

Query: 41  EHLILWNV 18
           + L L  +
Sbjct: 158 KSLNLHQI 165


>ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein [Arabidopsis
           thaliana] gi|75263255|sp|Q9FZ70.1|FDL1_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At1g13570
           gi|9802755|gb|AAF99824.1|AC027134_6 Unknown protein
           [Arabidopsis thaliana] gi|111074352|gb|ABH04549.1|
           At1g13570 [Arabidopsis thaliana]
           gi|332190914|gb|AEE29035.1| F-box/FBD/LRR-repeat protein
           containing protein [Arabidopsis thaliana]
          Length = 416

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/68 (38%), Positives = 41/68 (60%)
 Frame = -2

Query: 221 EVNQWMLFLSRNSVRVLVLTSSNRPYELPSYVFSCLELKMLILTTCIFKPPLEFERLLNL 42
           +++QW+LFLSRN ++ LVL      + +P+ +F+CL+L  L L  C F PP  F+    L
Sbjct: 98  DIDQWLLFLSRNGIKELVLKLGEGEFRVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYL 157

Query: 41  EHLILWNV 18
           + L L  +
Sbjct: 158 KSLNLHQI 165


>dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]
          Length = 416

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/68 (38%), Positives = 41/68 (60%)
 Frame = -2

Query: 221 EVNQWMLFLSRNSVRVLVLTSSNRPYELPSYVFSCLELKMLILTTCIFKPPLEFERLLNL 42
           +++QW+LFLSRN ++ LVL      + +P+ +F+CL+L  L L  C F PP  F+    L
Sbjct: 98  DIDQWLLFLSRNGIKELVLKLGEGEFRVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYL 157

Query: 41  EHLILWNV 18
           + L L  +
Sbjct: 158 KSLNLHQI 165