BLASTX nr result

ID: Atractylodes21_contig00027125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027125
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    81   1e-13
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    75   7e-12
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    72   4e-11
ref|XP_004159094.1| PREDICTED: uncharacterized protein LOC101231...    58   9e-07
gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp...    57   1e-06

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 34/57 (59%), Positives = 46/57 (80%)
 Frame = +3

Query: 75  GTGPNGTQQTGSNWRFRKLDMPLFDGDNPDGWILRAERYFHFYRLGEDQKMEAAIVA 245
           G G  G  + G +WR +KLD+P+F G+NPDGWI+RAER+F FYRL ED+K+EAA+V+
Sbjct: 84  GEGFGGGFRGGGSWRAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVS 140


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 31/57 (54%), Positives = 42/57 (73%)
 Frame = +3

Query: 75  GTGPNGTQQTGSNWRFRKLDMPLFDGDNPDGWILRAERYFHFYRLGEDQKMEAAIVA 245
           G G  G  + G  W+ ++LD+P+F G NPDGWILR ERYF FYRL  ++++EAA+VA
Sbjct: 64  GDGYEGGFRGGGGWKAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVA 120


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/52 (61%), Positives = 38/52 (73%)
 Frame = +3

Query: 90  GTQQTGSNWRFRKLDMPLFDGDNPDGWILRAERYFHFYRLGEDQKMEAAIVA 245
           G    G NWR +KLDMP FD  +PDGWILR ER+F FY L + +KMEAA+VA
Sbjct: 164 GHSGPGGNWRHKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVA 215


>ref|XP_004159094.1| PREDICTED: uncharacterized protein LOC101231524 [Cucumis sativus]
          Length = 993

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/52 (44%), Positives = 36/52 (69%)
 Frame = +3

Query: 90  GTQQTGSNWRFRKLDMPLFDGDNPDGWILRAERYFHFYRLGEDQKMEAAIVA 245
           G +  G   +F+K+DMP+F G +PD W+ RAERYF  ++L E +KM  +I++
Sbjct: 158 GEESAGDRSKFKKIDMPVFAGIDPDFWLFRAERYFQTHKLTESEKMTVSIIS 209


>gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
          Length = 473

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/48 (50%), Positives = 38/48 (79%)
 Frame = +3

Query: 117 RFRKLDMPLFDGDNPDGWILRAERYFHFYRLGEDQKMEAAIVAQLRGK 260
           +F+KL+MP+F+G++PDGWI +AE YF  + L E +K++ AIV+ + GK
Sbjct: 95  KFKKLEMPVFNGEDPDGWIYKAEYYFQMHLLNEQEKLKIAIVS-MEGK 141


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