BLASTX nr result

ID: Atractylodes21_contig00027119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027119
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]    89   5e-16
ref|XP_002511099.1| pentatricopeptide repeat-containing protein,...    84   1e-14
ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi...    81   9e-14
emb|CBI28459.3| unnamed protein product [Vitis vinifera]               81   9e-14

>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/89 (52%), Positives = 59/89 (66%)
 Frame = +2

Query: 269 EITAILRNRNWPHLLESSVHLLKNLNPDVIQSVIHQNQRADPNRLLHFFNWSIHQMGIPQ 448
           +I+  L+  NW  ++ SS H+   LNPDVI++V+HQNQ  DP RLL FF WS  QMG+PQ
Sbjct: 44  QISDFLKQNNWKTIMVSS-HIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQ 102

Query: 449 NLKSFLILAMVLCNSNQSRQASFVLGHMI 535
            L SF ILA+ LCNS     A+ VL  MI
Sbjct: 103 FLDSFSILAVQLCNSELFGLANGVLTQMI 131


>emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/89 (52%), Positives = 59/89 (66%)
 Frame = +2

Query: 269 EITAILRNRNWPHLLESSVHLLKNLNPDVIQSVIHQNQRADPNRLLHFFNWSIHQMGIPQ 448
           +I+  L+  NW  ++ SS H+   LNPDVI++V+HQNQ  DP RLL FF WS  QMG+PQ
Sbjct: 46  QISDFLKQNNWKTIMVSS-HIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQ 104

Query: 449 NLKSFLILAMVLCNSNQSRQASFVLGHMI 535
            L SF ILA+ LCNS     A+ VL  MI
Sbjct: 105 FLDSFSILAVQLCNSELFGLANGVLTQMI 133


>ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550214|gb|EEF51701.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1151

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/96 (47%), Positives = 61/96 (63%)
 Frame = +2

Query: 251 NEETVGEITAILRNRNWPHLLESSVHLLKNLNPDVIQSVIHQNQRADPNRLLHFFNWSIH 430
           ++ TV EIT++L+ +NW  L+ESS  L   LNPDV+  VI QNQ  DP RL  FFNW   
Sbjct: 41  SDNTVKEITSLLKQKNWQFLIESSP-LPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNS 99

Query: 431 QMGIPQNLKSFLILAMVLCNSNQSRQASFVLGHMIE 538
           +    QNL +F IL+++LCNS     A+ VL  MI+
Sbjct: 100 RTVFSQNLSTFSILSLILCNSGLFGNAANVLERMID 135


>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score = 81.3 bits (199), Expect = 9e-14
 Identities = 47/91 (51%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
 Frame = +2

Query: 251 NEETVGEITAILRNRNWPHLLESSVHLLKNLNPDVIQSVIHQNQRADPNRLLHFFNWSIH 430
           NE++V EIT +L + NW  L+ESS  + K LN D+I+SVI QNQ  DP RLL+FF WS H
Sbjct: 23  NEDSVREITTLLNSHNWQALMESS-DIPKKLNTDIIRSVILQNQVGDPKRLLNFFYWSQH 81

Query: 431 QMG---IPQNLKSFLILAMVLCNSNQSRQAS 514
           +MG     Q+L     LA+ LCNSN    AS
Sbjct: 82  KMGTSTAQQDLDVLSALAVNLCNSNWYGPAS 112


>emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 81.3 bits (199), Expect = 9e-14
 Identities = 47/91 (51%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
 Frame = +2

Query: 251 NEETVGEITAILRNRNWPHLLESSVHLLKNLNPDVIQSVIHQNQRADPNRLLHFFNWSIH 430
           NE++V EIT +L + NW  L+ESS  + K LN D+I+SVI QNQ  DP RLL+FF WS H
Sbjct: 32  NEDSVREITTLLNSHNWQALMESS-DIPKKLNTDIIRSVILQNQVGDPKRLLNFFYWSQH 90

Query: 431 QMG---IPQNLKSFLILAMVLCNSNQSRQAS 514
           +MG     Q+L     LA+ LCNSN    AS
Sbjct: 91  KMGTSTAQQDLDVLSALAVNLCNSNWYGPAS 121


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