BLASTX nr result

ID: Atractylodes21_contig00027109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027109
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleop...   244   2e-62
ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleop...   239   7e-61
gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]        236   8e-60
ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-58
ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleop...   223   7e-56

>ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
           [Vitis vinifera] gi|302141700|emb|CBI18903.3| unnamed
           protein product [Vitis vinifera]
          Length = 176

 Score =  244 bits (623), Expect = 2e-62
 Identities = 116/168 (69%), Positives = 144/168 (85%)
 Frame = -3

Query: 818 KEDDNVALEYNSNNVKKAKLNSTXXXXXXXXXXXXXPKKPILSDVDTLISLELGSAMRVS 639
           +E+++V   YNSNNVKKA+L+ST             PK+P LSDVDTLI+LELGSAMR+S
Sbjct: 9   REEEDVG-SYNSNNVKKARLHSTLTALLDDPILADVPKEPTLSDVDTLINLELGSAMRIS 67

Query: 638 VLKLDRTSFDVAVMNSATLKDLKLAVQKKINEMEQSKMGHRHISWKHVWRNFCLSYHNEK 459
           V+KLD TSFDVAV+NSAT+KDLKLA++KKIN+MEQSKMGHRHISWKHVW NFCLSY+N+K
Sbjct: 68  VIKLDSTSFDVAVLNSATVKDLKLAIKKKINDMEQSKMGHRHISWKHVWANFCLSYYNDK 127

Query: 458 LLNDEAILQDHGVRNHSQVHFIPYVMSRASKQHSRRRKHRFFHGLNRR 315
           L+ND + LQD G+ N+SQVHF+P++MS+ S++HSRRRKHRFFHGLN+R
Sbjct: 128 LINDGSALQDFGIHNNSQVHFVPFIMSKGSQRHSRRRKHRFFHGLNKR 175


>ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 181

 Score =  239 bits (610), Expect = 7e-61
 Identities = 117/170 (68%), Positives = 141/170 (82%)
 Frame = -3

Query: 827 SAVKEDDNVALEYNSNNVKKAKLNSTXXXXXXXXXXXXXPKKPILSDVDTLISLELGSAM 648
           S +K+++N A+ Y+SNNVKK +LNST             PK P LS VDTLISLELGSAM
Sbjct: 11  SIIKDEEN-AVGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAM 69

Query: 647 RVSVLKLDRTSFDVAVMNSATLKDLKLAVQKKINEMEQSKMGHRHISWKHVWRNFCLSYH 468
           R+SVLKLD T+ DV +MNSATLKDLKLA++KK+NEMEQSKMGHRHISWKHVW NFCL++ 
Sbjct: 70  RISVLKLDGTAIDVVIMNSATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHL 129

Query: 467 NEKLLNDEAILQDHGVRNHSQVHFIPYVMSRASKQHSRRRKHRFFHGLNR 318
           NEKLL+D ++LQD G+RN+SQV FIPYVMS++S+ HSRRRKHRFFHGLN+
Sbjct: 130 NEKLLDDSSVLQDFGIRNNSQVRFIPYVMSKSSRTHSRRRKHRFFHGLNK 179


>gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 181

 Score =  236 bits (601), Expect = 8e-60
 Identities = 112/172 (65%), Positives = 139/172 (80%)
 Frame = -3

Query: 833 TLSAVKEDDNVALEYNSNNVKKAKLNSTXXXXXXXXXXXXXPKKPILSDVDTLISLELGS 654
           ++ ++ +D+   + Y+SNNVKK +LNST             PK P LS VDTLISLELGS
Sbjct: 8   SMKSMSKDEENVVGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGS 67

Query: 653 AMRVSVLKLDRTSFDVAVMNSATLKDLKLAVQKKINEMEQSKMGHRHISWKHVWRNFCLS 474
           AMR+SVLKLD T+ DV +MNSATLKDLKLA+++K+NE EQSKMGHRHISWKHVW NFCL+
Sbjct: 68  AMRISVLKLDGTAIDVLIMNSATLKDLKLAIKQKVNETEQSKMGHRHISWKHVWANFCLA 127

Query: 473 YHNEKLLNDEAILQDHGVRNHSQVHFIPYVMSRASKQHSRRRKHRFFHGLNR 318
           +HNEK+L+D ++LQD G+RN+SQV FIPYVMS+ S+ HSRRRKHRFFHGLN+
Sbjct: 128 HHNEKILDDSSVLQDFGIRNNSQVRFIPYVMSKNSRTHSRRRKHRFFHGLNK 179


>ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|222843666|gb|EEE81213.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  231 bits (589), Expect = 2e-58
 Identities = 117/171 (68%), Positives = 138/171 (80%)
 Frame = -3

Query: 827 SAVKEDDNVALEYNSNNVKKAKLNSTXXXXXXXXXXXXXPKKPILSDVDTLISLELGSAM 648
           S+ K +D V   YNS+NVKKAKL ST             PKKP LSDVDTLISLE+GSAM
Sbjct: 3   SSSKGEDEVG-GYNSSNVKKAKLQSTLAALLDDPILSDVPKKPTLSDVDTLISLEMGSAM 61

Query: 647 RVSVLKLDRTSFDVAVMNSATLKDLKLAVQKKINEMEQSKMGHRHISWKHVWRNFCLSYH 468
           R+SV KLD TSFDVA+MNSAT+KDLKLA+++K+ EMEQSKMGHRHISWK VW NF LSYH
Sbjct: 62  RISVQKLDGTSFDVALMNSATVKDLKLAIKRKLIEMEQSKMGHRHISWKKVWANFALSYH 121

Query: 467 NEKLLNDEAILQDHGVRNHSQVHFIPYVMSRASKQHSRRRKHRFFHGLNRR 315
           N+KLL+D + LQD G+RN+SQVHF  YVMS+ S++HS+RRKHRFFHGLN+R
Sbjct: 122 NQKLLDDNSALQDSGIRNNSQVHFASYVMSKDSQRHSKRRKHRFFHGLNKR 172


>ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 209

 Score =  223 bits (567), Expect = 7e-56
 Identities = 107/152 (70%), Positives = 126/152 (82%)
 Frame = -3

Query: 773 KKAKLNSTXXXXXXXXXXXXXPKKPILSDVDTLISLELGSAMRVSVLKLDRTSFDVAVMN 594
           KK +LNST             PK P LS VDTLISLELGSAMR+SVLKLD T+ DV +MN
Sbjct: 56  KKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISVLKLDGTAIDVVIMN 115

Query: 593 SATLKDLKLAVQKKINEMEQSKMGHRHISWKHVWRNFCLSYHNEKLLNDEAILQDHGVRN 414
           SATLKDLKLA++KK+NEMEQSKMGHRHISWKHVW NFCL++ NEKLL+D ++LQD G+RN
Sbjct: 116 SATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLNEKLLDDSSVLQDFGIRN 175

Query: 413 HSQVHFIPYVMSRASKQHSRRRKHRFFHGLNR 318
           +SQ+ FIPYVMS++S+ HSRRRKHRFFHGLN+
Sbjct: 176 NSQIRFIPYVMSKSSRTHSRRRKHRFFHGLNK 207


Top