BLASTX nr result

ID: Atractylodes21_contig00027050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00027050
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527304.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   105   3e-21
ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
emb|CAN77516.1| hypothetical protein VITISV_040938 [Vitis vinifera]    98   8e-19
ref|XP_002283969.2| PREDICTED: U-box domain-containing protein 4...    97   2e-18
emb|CBI26345.3| unnamed protein product [Vitis vinifera]               97   2e-18

>ref|XP_002527304.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223533304|gb|EEF35056.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 1017

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/90 (53%), Positives = 65/90 (72%)
 Frame = +2

Query: 2   SIQEWKELNYCMRIRSCKTKLLSENDSSIKNALSQIQELITENSINKDWXXXXXXXXXXX 181
           SI+EW+ELNYC+RIR+C+ KLLS+ DSS+++ALS +Q+L+ ENS+NKDW           
Sbjct: 322 SIEEWRELNYCLRIRTCRAKLLSDADSSVEDALSHMQDLMRENSVNKDWISIGGLTDIII 381

Query: 182 XXXPNLHNQQVKTEVLVTLKDAVEGHARNK 271
               + HN  VK ++L+TLK  VEGHARNK
Sbjct: 382 SILGSSHNNDVKGKILITLKKIVEGHARNK 411


>ref|XP_002314659.1| predicted protein [Populus trichocarpa] gi|222863699|gb|EEF00830.1|
           predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/90 (52%), Positives = 62/90 (68%)
 Frame = +2

Query: 2   SIQEWKELNYCMRIRSCKTKLLSENDSSIKNALSQIQELITENSINKDWXXXXXXXXXXX 181
           SI+EW+ELNYC+RIR+ K KLL+  DSS++ AL+Q+Q+L+ ENSINKDW           
Sbjct: 338 SIEEWRELNYCLRIRASKAKLLASADSSVEEALNQMQDLMRENSINKDWISIGGLTDIII 397

Query: 182 XXXPNLHNQQVKTEVLVTLKDAVEGHARNK 271
                 HN+  K ++LVTLKD V+GH RNK
Sbjct: 398 CILGTSHNKDEKRKILVTLKDLVKGHVRNK 427


>emb|CAN77516.1| hypothetical protein VITISV_040938 [Vitis vinifera]
          Length = 1147

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/90 (53%), Positives = 61/90 (67%)
 Frame = +2

Query: 2   SIQEWKELNYCMRIRSCKTKLLSENDSSIKNALSQIQELITENSINKDWXXXXXXXXXXX 181
           SI+EW+E+NYC++IRS K KLLS  D S++ AL Q+Q+LI ENSINKDW           
Sbjct: 322 SIEEWREINYCLKIRSSKEKLLSGVDLSVEAALIQMQDLIRENSINKDWITIGGLTAIIV 381

Query: 182 XXXPNLHNQQVKTEVLVTLKDAVEGHARNK 271
               + HN+ VK  +L+TLK  VEGHARNK
Sbjct: 382 SILGSSHNKDVKRNILITLKYVVEGHARNK 411


>ref|XP_002283969.2| PREDICTED: U-box domain-containing protein 43-like [Vitis vinifera]
          Length = 1016

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/90 (52%), Positives = 61/90 (67%)
 Frame = +2

Query: 2   SIQEWKELNYCMRIRSCKTKLLSENDSSIKNALSQIQELITENSINKDWXXXXXXXXXXX 181
           SI+EW+E+NYC++IRS K KLLS  D S++ AL Q+Q+L+ ENSINKDW           
Sbjct: 322 SIEEWREINYCLKIRSSKEKLLSGVDLSVEAALIQMQDLMRENSINKDWITIGGLTAIIV 381

Query: 182 XXXPNLHNQQVKTEVLVTLKDAVEGHARNK 271
               + HN+ VK  +L+TLK  VEGHARNK
Sbjct: 382 SILGSSHNKDVKRNILITLKYVVEGHARNK 411


>emb|CBI26345.3| unnamed protein product [Vitis vinifera]
          Length = 1013

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/90 (52%), Positives = 61/90 (67%)
 Frame = +2

Query: 2   SIQEWKELNYCMRIRSCKTKLLSENDSSIKNALSQIQELITENSINKDWXXXXXXXXXXX 181
           SI+EW+E+NYC++IRS K KLLS  D S++ AL Q+Q+L+ ENSINKDW           
Sbjct: 322 SIEEWREINYCLKIRSSKEKLLSGVDLSVEAALIQMQDLMRENSINKDWITIGGLTAIIV 381

Query: 182 XXXPNLHNQQVKTEVLVTLKDAVEGHARNK 271
               + HN+ VK  +L+TLK  VEGHARNK
Sbjct: 382 SILGSSHNKDVKRNILITLKYVVEGHARNK 411


Top